Malus sylvestris (European crab apple): 126582213
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Entry
126582213 CDS
T09027
Name
(RefSeq) sister chromatid cohesion protein SCC2-like
KO
K06672
cohesin loading factor subunit SCC2
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msyl03036
]
126582213
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
126582213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PHD
PHD_2
PDS5
zf-RING_16
IFRD
Motif
Other DBs
NCBI-GeneID:
126582213
NCBI-ProteinID:
XP_050102222
LinkDB
All DBs
Position
9:complement(4414818..4427250)
Genome browser
AA seq
1808 aa
AA seq
DB search
MSYPVATSSSSSGSAHGGISLSNTVHSEVAPCLPLPSLPVFCGASDHLRLFDEPSRNSAW
LNRPDAAVASRIADLLRETDVSYLNLREDARAIPYGYGEPLKLHDEVLRYNPEAFEYYSP
GPIKGQVPVSSTVSDKKPFKPIVPIPKLSQRDYSVSDNNQLNDIPPNDISPPSSRKPKSK
KKASDTVVSTVGLDSAEIQDATIRSFCELVEDFCGRAEIFSDDREETEWLSMPLSDLRVL
ANEIMSLRAKKLLHLVPVDTFVRLLRILDHQIHRAEGLTIIEYDQSNSDVVSSIQCALES
IHAALAVMAHNQMPKQLYKEEIIERILEFSRHQIMDVMCAYDPSYRALHRPSQNGSLEVE
EDEEPDAEFGSASKKRRSIKTVKVQKSSFNRVSAAVNNILQKMCTILGLLKDLLLIERLS
DGCILQLVKTSFTTFMVDNIQLLQLKAMGLISAIFYSYTQHRTYVIDELIQLLWKLPVSK
RALRAYHLPDEEQRQIQMITALLIQLVHYSANLPESLRQESSGNSILELSVNADYPTKGH
EAATEACCHFWTRVLQRFASAKAQEASELKVMMENLVTDLLTTLNLPEYPASAPILEVLC
VLLLQNAGLKSKDIAARTMAIDLLGTIAARLKRDSVLCSSDKIWILQELVSDDGVDQTYP
RDACSVCLDGRVDKNVFVCQGCQRMFHADCMGVREYEVPNRSWHCQICLCWKQLLVLQSY
CKSQCKDEGIKDRSRSGRNTEVAFSITKPEVVQQMLLNYLQDTTSADDGHLFVRWFYLLL
WYKDDSKSQQKLMYYLARLKSKEIVRDSGTVFSLLTRDSVKKITLALGQKNSFSRGFDKI
LHLLLASLMENSPVIRAKALRAVSIIVEADPQVLGDKRVQSAVEGRFCDSAISAREAALE
LVGRHIASHPDVGLQYFEKVAERIKDTGVSVRKRSIKIIRDMCISNANFSEFTSACIAII
SRISDDESSIQDIVCKTFYEFWFEEPAGSQTHFFGDGSSVPLEVTKKTEQIVEMLRRMPS
HQPLVTVIKRNLALDFFPQSAKAIGINPVLLASVRNRCELMCKCLLEKILQVEEMNIQEV
DRQALPYVLALHAFCVVDPTLCAPASDPSQFVVTLQPYLKSQADNRVVAQLVESIIFIID
AVLPLVRKLPQTVVEELEQDLKNMIVRHSFLTVVHACIKCLCAVSKVAGKGAAIVENLIQ
VFFKRLDAQAVDNKQQVGRSLFCLGLLIRYGNSLPSNSDRTIDVVSSLSLFKKYLLVDDF
VIKVRSLQALGFVLIARPEYMLEKDIGKIVEATFSSSSDVRLRMQALQNMYDYLLDAESK
MGTDAASDNVIHCNVEGGNAVSVAAGAGDTNICGGIVQLYWDNMLVRCLDLNEQVRQSAV
KIVEVVLRQGLVHPITCVPYLIALETDPLEANSKLAHHLLMQMNEKYPAFFESRLGDGLQ
MSFSFIQSISSSSEHENKKIQAKASGNAKGKSDNVSLAQARLGVSRIYKLIRANRTSRNK
FMSSIVRKFDNTSWTPSVVPFLMYCTEILALLPFTTPDEPLYLVYSINRVVQVRAGALEA
KLKALTLHLLQRSAPHGNGIIEDGSAAQPFTRGMASFDLNGTVQQEPVFQPVTNYMSTEW
NGIIQQEPADQSVSNQATPFEANMHVTGSNSSGGFSIDDVQKFQADCLAAIAVQLLLKLK
RHLKIVYSLNDARCQAFSPGEPLKPGDVLSRQNIPFDLSDTRTNLPTTYQELVQRYQEFK
NALREDTIDFSTYTANIKRKRPAPRKGRKSVGGDDEGDDDDEDYSGGARRPSNIGRRGGY
GIRSRQRL
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgagttatccggtagccacttcgagctcgagctccggctcggctcacggaggtatcagc
ctctcgaacacggtgcactcggaggtcgcgccttgcttgcctctgccgtcgctgccggtg
ttctgcggggcatctgatcacctccggctgttcgacgagcccagtcgtaacagtgcgtgg
ctgaaccgccctgacgcagctgttgcgagtaggattgctgatctgcttcgagaaactgac
gtgtcgtacttgaaccttagggaggatgctagggcaattccatatggttatggagaacct
ttaaaacttcacgatgaagttcttcggtacaatccagaagcatttgagtactatagtcca
ggtcctattaaggggcaagtgcctgtcagtagtacagtatctgacaagaagcccttcaag
cctattgtacctataccaaagctttctcaaagggactattccgtatctgacaataatcag
ctcaatgatattcctcctaatgacatatctccaccatcttctagaaaaccaaaatccaag
aaaaaagctagtgataccgttgtgtcaacagtcggactcgattctgctgaaattcaagat
gccaccatcagaagcttttgtgagttggtggaggatttctgtggcagagctgaaattttc
agtgatgacagggaagaaactgagtggttatctatgcctctttctgatcttagagtgctt
gcaaatgaaataatgtctcttcgagcaaagaagcttctacatttggttcctgtagatact
tttgttagattgttaaggattttagatcatcagatacatcgagctgaaggcttgactata
attgaatatgaccagtcaaattcagatgtggtttcatcaatacaatgtgcactggagtcc
attcacgcagcattagcagtaatggctcataaccagatgccaaaacaactatataaagaa
gagatcattgaaagaattctggagttttccaggcatcagataatggatgttatgtgcgct
tatgatccatcatatcgtgctttgcataggccaagtcaaaatgggtcgctcgaagttgag
gaagatgaagagcctgatgctgaatttggttcagcaagcaagaagagacgcagtatcaag
actgttaaagtgcagaaatcctcatttaacagggtctctgctgctgtgaataatattctt
cagaaaatgtgcaccattcttggtttactcaaggatttgttgttaatagaaaggttgtca
gatggttgtatcttacaactagtgaaaacaagctttacaacatttatggtggataatatc
cagctcttgcaactgaaggcaatgggtttaatcagcgcgatattctattcatacactcag
catcgcacatatgtgatagatgaattaattcagttgctttggaagttgccggtctcgaag
cgagctttgagagcctatcacctacctgatgaagagcaacggcagattcagatgatcact
gctttgctgattcagttggttcactatagtgcaaaccttcctgaatcattaagacaggaa
tcaagtggtaattccatcttagaactttctgtcaatgccgattatccaactaaaggtcat
gaggcagcaacagaggcatgttgtcacttttggactcgtgtacttcagcgctttgctagt
gcaaaggctcaggaagcttcagagttgaaagtaatgatggagaatcttgttactgatcta
ttgacaacattgaatttaccggaatatcccgcttcagctcctattctggaggttctttgt
gtcttgttactccagaatgctgggctgaaatctaaagacatagctgcacgtaccatggct
attgaccttctcggcacaattgctgcaaggttgaagcgtgattctgtactttgcagtagt
gacaaaatctggatacttcaggagttggttagtgacgatggggttgatcagacatatcca
agagatgcatgctcagtttgtttagatggtagggttgataaaaatgtctttgtatgtcaa
ggttgtcagagaatgtttcatgctgattgcatgggagtgagagaatatgaagttccaaat
cgaagttggcactgtcagatatgcctctgctggaagcaacttcttgttttacaatcctat
tgcaagtctcaatgcaaagatgaaggaatcaaggatcgaagtcgttcaggaagaaacact
gaagttgctttttcaattacaaaacctgaggttgtccaacagatgcttttgaattacctt
caagataccacatcagctgatgatgggcatctctttgttcgctggttttatctcttgttg
tggtacaaggatgattcaaaatcacagcagaagctcatgtactatcttgctcgactgaaa
tcaaaagaaatagttcgggattctgggactgttttttcattattgacaagggattcagtc
aagaaaattactttagcattgggacaaaaaaactctttctccagagggtttgataagatt
cttcatttgcttctggcaagcttaatggagaattctcctgtaatcagggccaaggcttta
cgagcggtcagtataattgtagaagctgatccacaggtattaggagataaacgcgttcaa
tcagctgttgaaggaagattttgtgattctgcaatttctgcaagagaagcagcactggaa
cttgtaggaaggcatattgcttctcatcctgatgttggtttgcagtattttgagaaagtt
gctgagagaattaaagatacaggagtaagtgttcgaaagcgatccatcaaaatcatacga
gatatgtgcatttcaaatgcaaacttctccgaatttacaagtgcctgcattgctatcatc
tcccgtattagtgatgatgaatcaagtatacaggatattgtttgcaagacattttatgag
ttctggtttgaggaacctgctggttcacaaactcatttctttggagatggtagctctgtt
ccattggaggtgactaaaaaaactgaacagatcgttgagatgttgaggaggatgccaagt
catcaacctcttgtgacagtcattaaacgcaacttggcccttgatttttttccacaatcg
gctaaagctattgggatcaaccctgtcttgcttgcatctgtacgcaaccgctgtgagtta
atgtgcaagtgcttactggaaaagatattgcaggtagaggaaatgaatatccaggaggta
gataggcaggcacttccgtatgtgctagctttgcatgcattctgtgttgtggatccaaca
ctttgtgcaccggcttctgacccttcacagtttgtggtcactcttcagccttatctaaag
agtcaggctgataatcgagtggttgcacagttagtggagagtataatctttataattgat
gctgttctgcctttggtaagaaagttaccacaaactgttgtggaagaacttgaacaagac
ttaaagaacatgattgttcggcattccttcttgactgttgtgcatgcttgcataaagtgc
ctctgtgctgtgagtaaagtggcaggaaaaggtgctgctatagtggagaatcttatccag
gtgttcttcaaacgtttggatgctcaggcagtagataacaagcagcaagtggggcggtct
cttttctgtctcggattgcttatccgttacggcaactctttgcccagtaactccgacaga
acaattgatgttgttagcagtctcagcttgtttaaaaaatatcttctagtggatgatttt
gtaataaaggttcggtcattacaggcattgggctttgttctaatagctaggcccgaatat
atgttggaaaaagatattgggaagatagtagaggcaacattctcttctagctctgacgtt
cgtcttaggatgcaagcattgcaaaacatgtacgactatcttcttgatgctgaaagtaaa
atgggaacagatgcagccagtgataatgtgattcattgtaatgtggaaggcggcaatgct
gtatctgttgctgcgggtgccggagatactaatatctgtggtggtatagttcagttgtat
tgggataatatgttggtgagatgtttagaccttaatgaacaagttcgccaatctgcagtt
aagattgttgaagttgtgctgcgccaagggcttgtacatcctattacatgtgttccatac
cttattgcactcgaaacagatccactggaggccaactcgaagttagctcatcatttactg
atgcaaatgaatgaaaagtaccccgcatttttcgaaagccgcctgggagatggccttcaa
atgtcttttagtttcatacagtccataagttctagttctgaacatgagaacaaaaaaatt
caagcaaaggcttctggaaatgcgaagggaaaatctgataatgtttctctcgcacaagca
agactaggggtttctcgaatctacaagcttattcgtgctaaccggacttcaagaaacaaa
tttatgtcttcaattgttcgcaagttcgataatactagctggacaccttcagtagtccct
ttcctgatgtactgcacagagatactcgccttgctacccttcacaacacctgatgagccg
ctttacttggtctattccataaatagagtagtacaagttagggctggggcgctcgaagca
aaacttaaagctctgactttgcatttgttacaaagaagcgcacctcatgggaacggcata
attgaagatggttcagctgctcaaccttttacgagaggaatggcgtcattcgatttgaat
gggacagttcaacaagaaccagtgtttcaaccagttacaaattatatgtcaacggagtgg
aatggtataatacaacaagagccagcagatcagtctgtctcaaatcaagctaccccgttt
gaggcaaacatgcacgttacgggctccaacagttctggtggcttctcaatagatgacgta
cagaaattccaggcagactgcctggcggctattgcggtgcagcttcttttgaaattaaag
agacacctaaaaattgtgtacagcctgaacgatgcaaggtgccaggctttttctccgggc
gaaccccttaaaccgggagatgtactctccaggcagaacattccttttgacctcagtgat
acccgcaccaatttgcctacaacttatcaagaattggttcaaagatatcaggaattcaag
aatgcgttgagggaggatacgattgatttctcaacttacactgcaaacatcaagagaaaa
cgcccagccccgagaaaagggcggaaatctgtgggtggagatgacgagggcgatgatgac
gacgaggattattcaggtggggctcggaggccgagtaatattggaaggagaggtggctac
ggtatcagaagtcgacagcggttatag
DBGET
integrated database retrieval system
