Malus sylvestris (European crab apple): 126582219
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Entry
126582219 CDS
T09027
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126582219
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msyl01009
]
126582219
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126582219
03036 Chromosome and associated proteins [BR:
msyl03036
]
126582219
Protein phosphatases and associated proteins [BR:
msyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
126582219
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
126582219
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
126582219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
126582219
NCBI-ProteinID:
XP_050102234
LinkDB
All DBs
Position
9:1062155..1065763
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AA seq
513 aa
AA seq
DB search
MIKQILNRLPRKPKSSEHRVGGSSTSNSNVSTGSRGNSISSNKYASSSTTSFSSANSTPN
FGVNVTSKLNGNSLAYEALPSFKDVPNAEKQNLLIKKLNLCCVVFDFNDPTKNIKEKEIK
RQTLVELVDYIASANGKFSETVMQEIVKMVSINLFRTLTSTPLENKALESFELEEEEPSM
DPAWPHLQIVYEFFLRFVASPETDAKLAKRYIDHSFVLRLLGLFDSEDHRERDYLKTVLH
RIYGKFMVHRPFIRKAINNIFYHFIFETEKHNGIAELLEILGSIINGFALPLKEEHKLFL
VRVLIPLHKPKCIPLYHQQLSYCITQFVEKDCKLADTIIRGLLKYWPITNSSKEVMFLGE
LEEVLEATQPAEFQRCMVPLFRQIGRCLSSSHFQVAERALFLWNNDHIVNLIKQNRHVLL
PIIFPSLEKNARNHWNQAVQSLTLNVRKIFSDIDPELFEECLLKFQEDEAQETVNSEKRH
DTWKRLEEIAAKNATSNEAVLVSPKGATGKPSG
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacagatacttaataggctcccgaggaagcccaagtcatctgagcatcgtgtg
ggaggatcctctacctctaattcaaatgtttccaccggttcaagaggcaactctatatca
agtaacaagtatgcgagctcgagtactacatctttttcgagcgctaattctactccaaac
tttggagtaaatgtgacttcgaagcttaatgggaactcattggcttatgaggcattgcct
agcttcaaagatgtcccgaatgcagagaagcagaatttgttgataaaaaagttgaacttg
tgttgtgttgtctttgacttcaatgacccgacaaagaacatcaaggaaaaggagatcaag
cgtcagacattggtagagcttgtggattacattgcttctgctaatgggaaattctcagaa
accgtcatgcaagaaatcgtaaagatggtgagcataaatttatttagaacactcacttct
acaccccttgaaaacaaagcattagagtcctttgagttagaagaggaagagccttcgatg
gacccagcatggccgcacttgcaaattgtgtatgaattcttcctgaggtttgttgcatca
cctgagacggatgcaaagttggctaagagatacatagatcactcctttgttctcaggttg
ttaggtctttttgattcagaggaccacagagagagggattacttgaaaacagttctgcac
cgcatctatgggaaatttatggtccaccgcccgttcatccgcaaagcaatcaacaacatc
ttctatcattttatttttgaaactgaaaagcataatgggattgcagagctgttagagatt
ttgggaagtataataaatggttttgctctgccgctgaaagaagagcacaaactctttctt
gttcgagtgcttattccacttcacaaaccaaagtgcatacccttgtaccaccagcagttg
tcgtactgcattactcaatttgtggagaaagactgcaaacttgctgatacaataattcgg
ggtttactcaaatattggcctattaccaatagttctaaggaggtcatgttcttaggtgaa
ctggaagaagttttagaagcaactcagcctgcagagttccagcgctgcatggtgccgctg
tttcgccaaattggtcgttgcttaagcagttcacattttcaggtggcagagcgagctctg
ttcttatggaataacgatcacattgtgaacctaatcaaacagaaccgccatgtcctactg
ccaatcatattcccttcattggagaaaaatgcaagaaaccactggaaccaggcagtacag
agcctgacactaaatgtccgtaagattttctctgatattgaccctgagctttttgaggaa
tgcttgctcaaattccaggaagatgaagcacaagagactgtaaatagtgagaaacgtcac
gatacttggaaacgtttggaagagattgctgcaaagaatgctacgagcaatgaagcagtg
cttgtgtcccccaaaggagccaccggcaaaccttctggctag
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