Malus sylvestris (European crab apple): 126582232
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Entry
126582232 CDS
T09027
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126582232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126582232
Enzymes [BR:
msyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
126582232
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
126582232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
126582232
NCBI-ProteinID:
XP_050102247
LinkDB
All DBs
Position
9:18267334..18273400
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AA seq
709 aa
AA seq
DB search
MVSSEGLSAPLSPLQAAVRQYGVTKPISTAGPTEVDIQRTLELEKFLVEAGLYESKEEVA
KREEVLQRIGQIVKDWVKQLTRLRGYTDQMVEDANALIFTFGSYRLGVHGPGADIDTLCV
GPSYINREEDFFFVLHNILAKMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVV
PEDLDISDVSLLYDIDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYS
NVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFS
VWDPRRYPRDRTHHMPIITPAYPCMNSSYNVSQSTLRVMVEQFCYGNKICEEVELNKAQW
CALFEPYLFFESYKNYLQVDIVAADVDDLRAWKGWVESRLRQLTLMIERDTLGMLQCHPY
PHEYFDANKQCAHSAFFMGLQRKQGEKVQGQQFDIRGTVDEFRHSINMYVFWKPGMEIYV
SHVRRRQLPPYVYPDGCKRPQPSRVIAQQQANDGEVCGSGSSERHLKRKDLDGVEVNQDT
TPQKRQSTSPPPHDSVSPVIISHNASSACPEPSDKGFSMEVVESNKRTLSGEMEPEYASN
SSTITHVSSKGSCDDAGFGLVAGICEGNTRNVDGSSVGSNNPGYLQGDVCGADSKGLSDN
GCINGNLQQNGSREALEKVNAAFGMVLNSSEGVNSEQITGLRFSLTSTA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggtgagttcagagggattgagtgctccgctgtcgcctcttcaagcggcggtgaggcag
tacggagtgacaaagccaatatcgactgcggggcctaccgaagtcgatattcagaggaca
ttggagttggagaagtttttggttgaagctgggctttatgagagcaaagaggaagttgcc
aagagagaggaggttcttcagcgtatcgggcagattgtcaaggattgggtgaagcaactt
actcgcttgagaggatacacagatcaaatggttgaggatgctaatgctcttatttttaca
tttggctcctatagactaggggtgcatggtcctggtgctgacatagacacattatgtgtt
gggccatcctatatcaatcgagaggaagacttcttctttgtattgcacaacattctggct
aagatggaagaggtgaccgaactgcaaccagtgccagatgctcatgttcctgtaatgaaa
tttaagtttgacggaatatcgattgacctcctttatgctagtatttctctcttggttgta
ccagaagacctggacatttctgatgtatctctgttgtacgatatcgatgagcctactgtt
cgaagtcttaatggctgcagggttgctgatcaaattctaaagcttgttccaaatgttgag
catttttgtacaacactcagatgcttgaagttttgggcaaaaagacgtggtgtttattcc
aatgttactggatttcttggcggagtgaactgggctcttcttgttgcccgggtttgccag
ctttatcccaatgcagttcccagcatgctggtttctcgattcttcagggtctatacgcag
tggcgttggccaaatcctgtcatgttgtgtcccattgaagaggatgaactcggcttttct
gtttgggaccctcgcagatatcctcgtgaccggactcatcatatgccaattattactcct
gcatacccttgtatgaattctagctataatgtttcacaaagtactctgcgtgttatggtc
gagcagttctgttacggaaacaaaatctgtgaggaagtggaattgaataaagctcaatgg
tgtgctttgtttgagccgtacttgttctttgaaagctacaaaaactatctccaggttgac
atagttgctgctgatgttgatgacttgcgtgcttggaaaggctgggtggaatctcggctg
aggcaactaactctaatgattgaacgagatactttagggatgttacagtgccatccttat
ccccatgagtattttgatgctaataaacaatgtgcacatagtgcattttttatgggtttg
cagaggaaacagggtgaaaaggttcagggtcagcagtttgatatacgagggactgttgat
gagttcaggcattccattaatatgtacgtgttttggaaaccagggatggaaatttatgtt
tctcatgttcgtagaaggcaacttcctccttatgtgtaccctgatggttgtaaacgaccg
caaccatctagagttatcgcccagcagcaggctaatgatggcgaagtttgtgggagtggt
tctagcgagagacacctgaagaggaaggatcttgatggggtggaggtgaatcaagatact
acaccacagaaacggcaatctactagccctccgccccatgattcagtttctcctgtaatt
atcagtcacaacgcaagcagtgcatgtccagagccttcggataaaggttttagcatggaa
gtagtagagtcaaataaaagaacgctgtctggtgaaatggagcctgaatatgcctccaat
tccagtactattacacatgtttcaagcaagggcagttgtgatgatgctggatttggatta
gtggctggtatctgtgaagggaacactaggaacgtcgacggaagcagtgttgggagtaac
aacccaggatatttgcagggtgatgtatgtggggcagactccaaaggtctttcggataat
ggatgcataaatggaaacctacagcaaaatggatcccgtgaagcattagagaaggtgaac
gctgcatttgggatggtactcaattccagtgagggagtaaactcagaacaaataacaggg
ttgaggtttagcctaacatcaacggcctga
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