Malus sylvestris (European crab apple): 126582430
Help
Entry
126582430 CDS
T09027
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 7, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00900
Terpenoid backbone biosynthesis
msyl01100
Metabolic pathways
msyl01110
Biosynthesis of secondary metabolites
Module
msyl_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
126582430
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
msyl01006
]
126582430
Enzymes [BR:
msyl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
126582430
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
126582430
2.5.1.29 geranylgeranyl diphosphate synthase
126582430
Prenyltransferases [BR:
msyl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
126582430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
EcsC
UbiA
Motif
Other DBs
NCBI-GeneID:
126582430
NCBI-ProteinID:
XP_050102538
LinkDB
All DBs
Position
9:31833348..31834575
Genome browser
AA seq
388 aa
AA seq
DB search
MHSPKNLIPTSKEFMASFATILSYETPSLLKTAANFGRLNEILNGSTRTSSTALIRMKIK
ATATQVTDSASAFQPLLVNGEPIAKPLETTQFPVFKFDEYMSTKAKMVDKALNEAVPLQY
PKKIHRAMRYSLLAGGKRVRPVLCLASCELVGGDESLAIPAACAVEMIHTMSLIHDDLPC
MDNDDLRRGKPTSHKAFGEETAVLAGDALLSLAFEHVAAKTTKVVSPERVVRAITELGSA
VGSLGLVAGQMVDIQSEGKEVTLRELEYIHVHKTAKLLEASVVCGAIIGGGGEKEVERMR
KYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKATYPKLMGIEGAKNFAAELVAQ
AVQELAHFDAARAAPLYYLANYIANRQT
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcattcacccaaaaatttgataccaacaagcaaggaatttatggcttcttttgcaact
atcctaagctatgaaactccatcccttctcaaaaccgctgctaattttggtcgtctcaac
gaaattctgaatggcagcactagaacctcatcaactgctctcattcgcatgaagataaag
gccacagctacacaagttactgactcagcgtctgcattccaaccattgctcgtcaatgga
gaaccaatcgccaaaccactcgaaaccacccagtttccggtgttcaaattcgatgagtac
atgtcaacgaaggcaaagatggtggacaaggcgttgaacgaggccgtgcctttgcagtac
cccaagaaaatccatagggcaatgaggtactcgcttttggctggcggaaagcgcgtgcgg
ccggttttgtgtctcgcttcatgtgaattagttggaggggatgagtcacttgcaatccca
gcagcttgtgccgttgaaatgatccacaccatgtcgcttattcacgatgatctcccttgc
atggacaacgacgatcttcgtcgcgggaagcctaccagccacaaggcttttggggaggaa
accgcggttctagccggtgatgcgcttctttcccttgcctttgaacatgtagcggccaag
acaacaaaagtagtatcaccggagcgtgtggttcgagccatcactgagcttggttcggcc
gttggatcattaggcctcgtggcgggtcaaatggtggacattcaaagtgaaggcaaagaa
gtgacgctgcgagaactcgagtacattcacgtgcataagaccgcgaagctcctcgaggca
tcggtggtttgcggggcaatcatcggaggaggaggtgaaaaggaggtggagaggatgagg
aagtatgcaaggtgtataggtttgttgtttcaagtggtggacgacattttggacgtgacg
aaatcgtcagaggaattggggaagacggccgggaaagatttggcaagcgataaggcgaca
tatccaaagctgatggggattgaaggggcaaagaattttgctgccgagttggtggcgcaa
gcagtgcaagagcttgctcatttcgatgctgctagggcggctccattgtattatttagcc
aattatattgccaatagacagacatag
DBGET
integrated database retrieval system
