Malus sylvestris (European crab apple): 126582477
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Entry
126582477 CDS
T09027
Name
(RefSeq) serine/threonine-protein kinase VPS15-like isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
126582477
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
msyl01001
]
126582477
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126582477
Enzymes [BR:
msyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
126582477
Protein kinases [BR:
msyl01001
]
Serine/threonine kinases: Other
VPS15 family
126582477
Membrane trafficking [BR:
msyl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
126582477
Autophagy
Autophagosome formation proteins
PI3K complex
126582477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_CDC20-Fz
WDR55
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
HEAT
EIF3I
PK_Tyr_Ser-Thr
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
APH
Beta-prop_Vps41
Tti2
Cnd3
Motif
Other DBs
NCBI-GeneID:
126582477
NCBI-ProteinID:
XP_050102596
LinkDB
All DBs
Position
2:complement(31764926..31778041)
Genome browser
AA seq
1544 aa
AA seq
DB search
MGNKIARTTQVSASEYYLHDLPSSYNLVLKEVLGRSRFFKSIECKHDEGLVLVKVYFKRG
DSIDLREYERRLSLIKETFHTLDHPHVWPFQFWQETDKAAYLVRQFFFNNLHDRLSTRPF
LSLIEKKWLAFQLLLALKQCHDKGICHGDIKCENVLVTSWNWLYLADFASFKPTYIPYDD
PSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVAQDAPLRPSMDIFAVGCVIAELFLEGQP
LFELSQLLAYRRGQYDPSQLIEKIPDSGIRKMILHMIQLEPELRHSADSYLQEYTTIVFP
SYFSPFLHNFHCFWNPLHSDMRVALCQSVFHEILKQMMSSRSTEDTRTGLGTPSSAHGMS
GRTSQEAVVMQNKGLTRGSFTKSEEMGKGLKCDQLELLGDINTLLRDVKQSNNYSATKPM
LNDNPDSAFSPNLGNYGMQSPGELLQSISNAFRRNDHPFLKKITLNDLNSLMSKYDSHSD
TFGTPFLPLPENSIRCEGMVLITSLLCSCIRNVKLPHLRRRAILLLKSCALYIDDEDRLQ
RVIPYVVAMLSDAAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEE
SVRICYASNIAKLALTAYGFLVHSMRLSEAGVLDELSSAKKPLASSSETSGQLAVLRKSI
AEVIQELVMGPKQTPNIRRALLQDISNLCCFFGQRQSNDFLLPILPAFLNDRDEQLRAVF
YGQIVYVCFFVGQRSVEEYLLPYIEQAVSDVTEAVIVNALDCLAILCKSSFLRKRILLEM
IERAFPLLCYPSQWVRRSAVTFIAASSDSLGAVDSYVFLAPVIRPLLRRQPASLASEKAL
LLCLKPPVSRQVFYQVLENARSSDMLERQRKIWYNSWPQSKQWESVDLLHKGVEELSSTG
SWPDKQQSAENHKLTGKALQQGELTECDDGEAKLRSMGSFTRSSSTVDIHDPLSSEKLQF
SGFMWPQGSYVNSFMCDKSSVGIPLYSFSMDKRAVGGPPATSDSSSQVNSVGIGASAMPW
MDPVNKSFSLASSVPAPKFVSGSFNIGNGSKQFYRVVHEPDGRDNDQTAFGNSKLQDMGL
SGTTKGAIPAEDASTASDLTGMPSPSRSSSIPDSGWRPRGVLVAHLQEHRSAVNDIAIST
DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCSAMLRGSAQVVVGACDG
MIHMFSVNYISRGLGNVVEKYSGVADIKKKDIKEGAILSLLNFSADNCTNQMVMYSTQNC
GIHLWDIRLNTNSWTLRATPEEGYVSALVTGPCENWFVSGSSRGVLTLWDMRFLIPVNSW
QYSSVCPIEKMCLFLPPPNASVSAAARPLIYVAAGSNEVSLWNAENGSCHQVLRVANYES
DAEISEVPWALAKSSSKSSKPDLRRNVNPHYRVDELNEPPPRLPGIRSLLPLPGGDLLTG
GTDLKIRRWDHYSPDRSYSICGPNLKGVGNDDFYATRSSFGVQVVQETKRRPLTSKLTAK
AVLAAAATDSAGCHRDSILALASVKLNQRHLISSGRDGAIKVWK
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaagatcgctcgaacgacgcaagtgtcggcgtcggagtactacctccacgac
ctgccgtcgtcctacaacctggtcctgaaggaggttctagggcggagccgcttcttcaag
tcgattgagtgcaagcacgacgagggtttggtcctcgtcaaggtctatttcaagcgcggt
gactccattgatctccgcgagtacgagcgccgcctctccctcatcaaggaaaccttccat
actctcgatcaccctcacgtttggcccttccagttttggcaagagacagataaagctgct
tatcttgtgaggcaattcttcttcaacaatctgcacgaccggttaagcacccgcccgttt
ctcagtctaatcgagaagaaatggttggcctttcagttacttcttgctctgaagcagtgc
catgataaaggaatatgtcacggtgatattaagtgtgagaatgtgttggtgacttcttgg
aattggctctaccttgctgactttgcctctttcaaacccacctacataccatatgacgat
ccttctgatttctcttttttctttgacaccggaggaagaaggctttgttatcttgctcct
gagagattttatgagcatggaggtgagatgcaggttgcacaagatgcaccattaaggcca
tctatggacatatttgctgtagggtgtgtaattgctgagcttttccttgagggacagcca
ctgttcgaactctctcaacttcttgcttatcgtagagggcaatacgatcctagccaactt
attgaaaagataccagattctgggattcgcaagatgatacttcatatgattcagttggaa
ccagagttgcgacattctgctgatagctaccttcaggagtatacaaccattgtttttcca
agttacttctctccatttctgcataatttccattgtttctggaatcccctgcattcagat
atgagggttgcactttgccagagtgtttttcatgagatacttaaacaaatgatgagcagt
aggtcaactgaggacactcgaacaggactgggaactccttcaagtgcccatggcatgagt
ggtagaacttctcaggaagcagttgtaatgcagaacaagggtttgacaaggggctcattt
acaaagagtgaagagatgggtaaaggcttaaaatgtgatcaattggaacttctcggcgat
atcaatacccttcttcgggatgttaaacaaagtaataattattctgctaccaagccaatg
cttaacgataatcccgattctgcattttccccgaatcttggcaactatggcatgcaatct
cctggtgaattacttcaatctatctctaatgcatttaggagaaacgatcatcctttcctg
aaaaagattacattgaatgatttgaattctttgatgtcgaagtatgacagccattcagat
acctttggcacaccatttctgccattacctgaaaacagtatcagatgtgagggcatggtt
ctgattacctcgttgctctgttcatgcatacgtaatgtaaaattgcctcatttaaggagg
agggccatacttttgctgaaatcctgtgccttgtatattgatgatgaagatcgtttgcaa
cgtgtaattccatatgttgttgcaatgctttcagatgcagctgcaattgtgcgttgtgct
gccttggagacgttgtgtgacatactacctctagtccgagattttcctcccagtgatgca
aaaatttttccggagtatattctgccaatgctttccatgcttccggatgatccagaagaa
agtgtgaggatatgttatgccagtaatattgctaagctggcgctaactgcttatggtttc
ttggttcactcaatgcgcttgagtgaggctggggtacttgatgaattaagttctgcaaaa
aagccactggcatcatctagtgagacatctggtcaacttgcagtgttgaggaagtctata
gctgaggtcattcaagaacttgttatgggtccaaagcaaactccaaatatcaggagagca
ctccttcaggacattagcaacctatgctgcttctttggccagagacagagtaatgacttt
ttgttacccattctccctgcttttctgaatgatcgagatgagcagctgagagcagtattc
tatgggcaaattgtatatgtgtgcttctttgtgggtcaaagaagtgtggaagaatatcta
ttaccttacattgagcaggctgtaagtgatgtaacagaggctgtaattgtcaatgcattg
gactgtttggccattttgtgcaaaagtagtttcttgcggaagaggatacttcttgaaatg
attgagcgtgcatttccattgttatgctatcctagtcaatgggtaagaaggtcagctgtc
actttcattgcagccagtagtgacagcttaggtgctgtagattcctatgtctttctagcc
cctgttattcgccccctactccgcagacagccagcatctcttgcttctgaaaaggctctc
cttttgtgtttaaagcctccagtctcaagacaggttttttaccaagttctagaaaatgca
aggagttcagacatgttggaaagacagagaaagatatggtacaactcttggcctcagtct
aaacaatgggaaagtgttgacttacttcataaaggggttgaggaactgagttcaacaggg
agctggccagacaagcaacaaagtgccgaaaatcataaacttactggaaaggccttgcaa
caaggagagttaactgaatgtgatgatggtgaggctaagttgagaagtatgggaagcttt
acacggtcttctagcacagtcgacattcatgatcctttgtcctctgaaaagttgcaattt
tcagggtttatgtggccacagggaagttatgtgaatagcttcatgtgcgataaatcatct
gttggcatacctttatactcctttagcatggacaagcgagcagttggaggtcctcctgca
acatctgattcttcttcacaagtgaattctgtaggaattggtgcatcagctatgccttgg
atggatccagtaaataaatcatttagtttggctagttctgttccagcacctaagtttgtg
tcaggatcattcaacattggcaatggttccaaacagttctatagagtagtacatgagcca
gatggtagggataatgatcaaacagcctttggtaatagcaagcttcaagatatgggatta
tctggcactacaaaaggtgctattcctgcggaagatgcatccactgctagtgatctaaca
ggaatgccgtctccttcacgaagttcatcaattccagactctggttggaggcctcgtggg
gtgttggttgctcacctgcaagaacatcggtctgctgtcaatgacatagccatttcaact
gatcatagcttttttgtgagtgcatctgatgattccactgttaaggtgtgggattcaaga
aagttggaaaaggacatatcatttcggtcaaggttgacttatcatctagaaggaagccgt
gcactgtgcagtgcaatgctccggggatctgcccaagtcgtggtaggagcatgtgatggc
atgatacatatgttttctgttaattacatctccaggggacttggtaatgttgttgaaaag
tattcaggtgttgctgatatcaagaagaaggatatcaaggaaggtgccatattgagcctg
ttgaatttctcagcggataactgcacaaatcagatggttatgtacagcacccaaaattgt
gggatccatctttgggatataaggctgaataccaattcttggacattgagagcaactcct
gaggagggctatgtgtctgcgctggtaacaggcccctgtgaaaattggtttgtgtcagga
tcttcgaggggtgtgcttactctttgggatatgaggttccttattcctgtaaactcatgg
cagtattcttctgtttgccctatagagaaaatgtgcctgtttcttcctccaccaaatgcc
tctgtgtctgctgctgcaaggccccttatttatgttgcggcaggttccaacgaagtgtct
ctttggaatgctgaaaatggaagctgtcaccaggtgctgagagtggcaaattacgaaagt
gatgctgaaatatctgaagttccttgggccttggctaagtcatcaagtaaaagttccaaa
ccggatctgagacggaatgtcaatccccactacagagttgatgaactaaacgaaccccct
cctcgtcttcctggcatccgttcattgctgcccttacctggaggtgatttgttaactgga
ggaaccgacttgaagatacgtcgatgggatcattacagtcccgatcgaagttactctatt
tgtggaccaaacttgaagggagtcggaaatgatgatttctatgcaacaagatctagcttt
ggcgtgcaagttgtgcaggagacgaaaagacgacctctaacatcgaagctgacagccaag
gcagttcttgcggctgctgccactgattctgctggctgccaccgtgattcaatcctagcg
ttggcctcggttaagctaaatcagagacacttaatatcaagcggtagagatggggcaatc
aaggtttggaagtga
DBGET
integrated database retrieval system
