Malus sylvestris (European crab apple): 126582548
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Entry
126582548 CDS
T09027
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126582548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126582548
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
126582548
Prokaryotic type
Archaeal type
TFB
126582548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
DUF5937
Motif
Other DBs
NCBI-GeneID:
126582548
NCBI-ProteinID:
XP_050102643
LinkDB
All DBs
Position
9:4231874..4232833
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AA seq
319 aa
AA seq
DB search
METDEQLCSDCKKYTQVVIDHRSGDTICTDCGLIVEAFSIDVTAEWRNFADKDPKEDRAR
VGASLNPLLDNGILTTCISQEKKQNKNKDNAEGVVPPNNRLNNVATSNPQMSLAKATEHL
EAMACRLDKHGLPEGVLYDAKVLYKKAVDKKICRGRKFGAMMAACLFLACQENHSSRTPK
EIAGAANGPSMKEITKMVKLLKEELELVSKATDAGDLWRRYCSNLGMNSIQDRKAVEETL
KNLAKLDIRRSPTSVVAAVLYMIVKLASNGKTVEDVQQETGASVGTIKSTYKEIYPYAST
IVPNWYCKYLEDIKNLNTR
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatgaacagttatgttcagattgcaagaaatacacacaagttgtgattgac
caccggtccggtgacacgatctgcaccgactgtggtttgattgttgaagccttcagcatc
gatgtcaccgccgagtggcgaaattttgcggataaggatcccaaggaagaccgggctcgc
gtcggtgcatccttgaatcctttgctggataatggcattcttaccacttgtatttcccaa
gaaaagaagcaaaacaagaacaaggataacgccgaaggcgttgttcctccaaataaccgg
ttgaataacgttgcgacgtcgaaccctcaaatgtctctcgcaaaagctacagaacacctc
gaagccatggcttgccggctagacaagcatggccttcccgaaggcgtactctatgatgcc
aaagtgttatacaagaaggccgttgacaagaagatctgcagggggagaaagtttggtgct
atgatggcggcttgcctgttccttgcttgccaagaaaaccatagttcgcgaacaccaaag
gaaatcgccggggctgccaatggaccctccatgaaagaaattaccaagatggtaaaattg
ttgaaagaagagctggagctcgtttccaaagctacagacgctggggacctatggcggcga
tactgctcgaatcttggcatgaacagtattcaggatcggaaggctgtggaagagactctg
aagaacttggcgaagcttgacataaggagaagccctacatctgttgtggcagcggttctg
tacatgatagtgaagcttgcttccaatggcaagactgttgaagatgtccagcaagaaact
ggtgcttccgtggggacgattaaaagcacatacaaggagatttatccctatgcttcaacg
atagtacccaactggtactgcaagtacttggaggacatcaagaatctgaacactcgttga
DBGET
integrated database retrieval system
