Malus sylvestris (European crab apple): 126582839
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Entry
126582839 CDS
T09027
Name
(RefSeq) ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126582839
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msyl02000
]
126582839
04147 Exosome [BR:
msyl04147
]
126582839
04090 CD molecules [BR:
msyl04090
]
126582839
Enzymes [BR:
msyl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
126582839
Transporters [BR:
msyl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
126582839
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126582839
CD molecules [BR:
msyl04090
]
Proteins
126582839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
RsgA_GTPase
AAA_16
ABC_ATPase
Zeta_toxin
AAA_21
DUF87
AAA_15
AAA_5
AAA_30
Motif
Other DBs
NCBI-GeneID:
126582839
NCBI-ProteinID:
XP_050103021
LinkDB
All DBs
Position
9:34781946..34788780
Genome browser
AA seq
1296 aa
AA seq
DB search
MAQESGVDGATPQEHEDITSRSQVEVEKSTDTNGDHQGSDKSSGDEKLEKVPFSKLFSFA
DKTDTILMLAGTIGAIGNGLGMPLMTILLGEMINSFGSNQNNKDIVSAVSKVSLKYVYLA
IGTGVAASLQVSCWMVTGERQAARIRGLYLKTILRQDVAFFDLETNTGEVIGRMSGDTVL
IQDAMGEKVGKFLQLFSTFIGGFIIAFIKGWLLTLVMLSSIPLLVAAGAAMSIIISKMAT
RGQSAYAKAAIVVEQTIGSIRTVASFTGEKQATTNYKKYLADAYKSGVYEGTAAGACFGM
VMLVVFCTYALAVWFGSRMVRNNGYSGGDVLNVIVAVLTGSMSLGQASPCLSAFAAGQAA
AFKMFETISRKPEIDASDEKGKTLDDIRGDIDLREVYFSYPARPDEPIFDGFCLHISSGT
TAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQVKWIRSKIGLVSQEPVLFA
SSIMDNIAYGKDGATIEEIKAAAELANASKFIDKLPQGINTMVGEHGTQLSGGQKQRIAI
ARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVRNADVIAVI
HKGKMVEKGSHSELLKDPEGAYSQLIRLQEVNKGSDQTGEVQNKSDITAESFRQSSLRMS
LRRSISRNSSVGNSSRHSFSAAFGLPIGHASMHGTTLAEPEAAALASEQPPKVSLLRLAA
LNKPEIPALLLGTLAATANGVILPIFGVLISRVIKTLYEPPRQQKKDSEFWAIIFMVLGV
SSFLVIPARAYFFSVSGSKLIERIRLMCFERVVHMEVGWFDEPENSSGSVGARLSADAAI
VRALVGDALAQIVNSIATAIAGLFIAFISCWQLAFIILALIPLIGVNGYVQAKFMKGFSA
DAKMMYEEASQVANDAVGSIRTVASFCAEEKVMELYRRKCEGPTAAGKRQGLISGIGFGM
SSFFLFCVYATSFYAGAKLVKAGKTTFSDVFQVFFALTMAATGISQSSSMGPDSNKARSA
AASIFAIIDRKSKIDPSDESGMKLDNVKGEIELHHVSFKYPSRPDTQIFRDLNLTIHCGK
TVALVGESGSGKSTVVALLQRFYDPDSGHITLDGTELGKFNLKWLRQQMGLVGQEPVLFN
DTIRANIAYGKDGDATEAEIIAASELANAHKFISSLNQGYDTAVGERGIQLSGGQKQRVA
IARAIIKSPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAV
VKNGVIVEKGKHDKLINITDGFYASLVALHMSASTA
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggcccaggaaagtggcgtggatggggctacgcctcaagagcatgaggacatcacttca
agaagccaagtagaagtagagaaaagcaccgacacgaatggggatcatcaaggctcagac
aagagcagcggagatgagaaacttgaaaaagttccattttccaagctattttcatttgca
gataagactgatactatattgatgctcgccggcacaattggtgccattgggaatggcttg
gggatgccccttatgacgatattattgggggagatgatcaattcttttggatctaatcaa
aacaataaagacatagttagtgctgtttccaaggtctctctaaaatatgtctatttggca
atcgggacaggtgtggccgcaagtcttcaggtctcttgctggatggtaacaggggaaaga
caagctgcaaggataaggggtttgtatttgaaaacaattttgagacaagacgttgctttc
tttgatttggaaacaaatactggagaggtcattgggaggatgtctggcgacactgttctc
atacaagatgccatgggcgagaaggttggaaaatttttacaactattttcaacattcatt
ggagggtttataatagcattcatcaaaggatggcttcttacccttgtcatgttatcctcg
attcctctgcttgtggcagctggtgcagctatgtccatcattatatccaagatggcaacc
cgtggacaaagtgcttatgcaaaagcagcaattgtagttgaacagacgataggctccatc
agaaccgttgcatccttcactggggaaaagcaagcaacaacaaattacaaaaaatatctt
gcggatgcttacaaatcaggtgtttacgaaggtactgctgctggagcatgttttggcatg
gttatgctagttgtgttctgcacttatgccttggcggtatggtttggttcaagaatggta
aggaataatggatattccgggggtgacgtgctgaatgtgattgttgctgttttgactgga
tccatgtctctggggcaagcatcaccgtgcttgagtgcattcgctgctggtcaagctgca
gcatttaagatgtttgagactatcagtaggaaaccagagattgatgcttctgacgaaaaa
ggaaagacattggatgacattcgtggagatatagatctaagagaggtttacttcagttac
ccagccagaccagatgaaccaatattcgacgggttctgtcttcatatctctagtggcacc
actgcagctttggttggacaaagtggaagtgggaagtcaacagtcatcagtctgatagag
agattttatgatccacaagctggtgaagtgttgatagatggcataaacctaaaagaattt
caggtgaaatggattcggagtaaaattggtctcgtcagccaggaacccgtactgttcgca
tccagcattatggacaatattgcctatggaaaggatggtgctaccattgaagagataaaa
gcagcagctgaacttgcaaacgcctccaaatttatcgataaattgcctcagggcattaac
accatggtcggtgagcatggaactcagctatctggtgggcagaagcagagaattgctata
gcaagagcaattttgaaagatccacgaattttacttttggatgaagctacaagtgcactt
gatgcagaatctgagaggatagttcaagaagcattggatcggattatggtcaacagaact
actgttattgttgctcatcgtttgagcacggtgaggaatgcagatgtgattgctgtcatt
cataaaggaaagatggttgaaaaaggctcgcactcagaattactcaaggatcctgaagga
gcatactctcaacttatacgcttgcaagaagtaaacaagggttcagatcaaacaggagaa
gttcaaaacaaatctgatataactgctgaatcttttagacaatcaagtctaagaatgtcg
ttacgaagatccataagtcggaattcctctgtaggaaatagcagccgccattcattttca
gctgcctttggtttacccataggacatgctagcatgcatggcactacattggcagaacca
gaggccgctgccctggcatcagagcaacctccaaaggtctctctcctccgcctcgctgcc
ctcaacaagcccgagattccagcacttcttcttggaactttagctgcaaccgccaatggt
gtcatacttccaattttcggtgtgcttatttccagggtaataaagactttgtatgaacca
cctcgtcaacaaaagaaagattcagagttttgggcaattatttttatggtacttggtgtg
tcatcatttctggtgatcccagcacgagcatacttcttttcggtttccggtagtaagtta
attgaacgtatcagattgatgtgttttgagagagtggttcacatggaagttgggtggttt
gatgagcctgagaactcaagtggttcagttggtgcgaggctctcagcagatgcagcaata
gtgcgggcccttgttggagatgcactagctcagattgttaatagcattgcgaccgcaatt
gcaggtttgttcattgctttcatttcatgctggcagctggcatttattatcctcgcattg
attcctctgatcggagtcaacggatatgttcaagcaaagttcatgaaaggattcagtgcc
gatgcaaagatgatgtatgaagaagcaagccaagttgctaatgacgcagttgggagcata
cgaacagttgcttctttctgtgctgaagagaaggtaatggaactgtacagaaggaaatgt
gaaggccctacagcggcagggaaaagacaaggcttgatcagtggaataggatttggaatg
tcttctttctttctattttgtgtgtatgcaaccagcttctatgcgggagctaaactcgtc
aaggctggcaaaacaacatttagcgacgttttccaagttttctttgctttgaccatggca
gccacgggcatatctcagtcgagcagcatgggtcctgattctaataaagccaggagtgct
gctgcttctatatttgcaattatagacaggaagtctaagatagaccctagtgacgagtct
ggcatgaaattggataatgtaaagggagagattgagcttcaccatgtaagctttaaatat
ccatccaggccagatacacagattttccgagacctcaatttaaccattcactgtggcaag
acagttgccctggttggagaaagtgggagtggaaagtcgacagttgttgcattgttgcaa
cgattttatgatcctgattcaggtcatatcacacttgatggaactgaacttggaaagttc
aacttgaaatggttgaggcagcagatggggcttgtggggcaagaacctgtcttatttaac
gacacaatccgtgccaacattgcatatggaaaggatggtgatgcaactgaggcagaaatc
atagctgcgtcggagttggccaatgcacacaaatttattagtagcttgaatcaggggtat
gacacggcagtaggagaacgaggaatacaattatctggggggcagaagcaacgcgtagcc
attgcacgtgcaataatcaagagccccaagatattactgttggacgaagctacaagtgca
cttgatgctgaatctgagagagtggttcaagatgcattagacagggtgatggtaaaccga
acaacagtagtggttgctcatcgactatcgacaatcaagaatgctgatgtgatcgcggtg
gttaaaaacggagtgatcgtagaaaaaggaaagcatgataagctgatcaatattacagat
ggattttatgcatccttggttgctctgcacatgagcgcttcaactgcatga
DBGET
integrated database retrieval system
