Malus sylvestris (European crab apple): 126583229
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Entry
126583229 CDS
T09027
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-like isoform X1
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04144
Endocytosis
msyl04517
IgSF CAM signaling
msyl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
126583229
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126583229
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
126583229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126583229
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
msyl04812
]
126583229
Membrane trafficking [BR:
msyl04131
]
Others
Actin-binding proteins
Arp2/3 complex
126583229
Cytoskeleton proteins [BR:
msyl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
126583229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_WDR75_1st
Tricorn_2nd
Beta-prop_WDR36-Utp21_1st
PD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_SPT8
eIF2A
WD40_MABP1-WDR62_2nd
NBCH_WD40
Ge1_WD40
DUF2582
Beta-prop_NUP159_NUP214
BNR_3
Motif
Other DBs
NCBI-GeneID:
126583229
NCBI-ProteinID:
XP_050103514
LinkDB
All DBs
Position
9:complement(12409492..12415855)
Genome browser
AA seq
378 aa
AA seq
DB search
MAAVEVHKFAQCITCHAWSRDRSMLAFCPNNNEVHIYALLQGKWEKLHVLQKHDQIVSGI
DWSARANKIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVKWNPRENKFAVGSGAK
TVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNILLATASTDGKCRIFSTFIKVVDA
KESRTGPFADSKFGEQILQLDLSFSWSFGVRWSPSGNTLAYVGHSSMIYFVDDVGPSPLA
QNVAFRDLPLRDVLFLSERLLIGVGFDCNPMVFAADLHGIWHFIKFLGERKTTSSGPKYG
SQFSEAFGKLYGQQKHGLNNDANEHSRSRGRVHENCINCIVPLGEPGSSKVTRFSTSGLD
GKVVVWDMENQADLSEYL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggaagttcacaagttcgctcagtgcatcacttgccacgcttggagccgt
gatcgctccatgctcgcattttgtccaaacaacaatgaagttcacatctatgctctgttg
caaggaaagtgggagaagctgcacgttcttcagaagcatgaccaaattgtatctgggata
gactggagcgcaagggcaaacaaaatagttactgcatctcatgatcggaattcttatgtc
tggaatctagaaggatcagagtgggtaccaacccttgttatccttcggctaaatcgtgct
gcactctgtgttaagtggaatccaagagaaaacaagtttgctgttggaagtggggcaaaa
actgtttgtatatgctactacgagcaagagaataactggtgggtcagtaaacttatcaga
aaaaggcacgactcttctgtgacaagtgttgcttggcatcccaataatattcttctagca
acagcatctacagatggaaaatgccgtatattttccacttttattaaggtcgtcgatgca
aaggaatcaagaacaggcccatttgctgattcaaaatttggagagcaaattcttcagctt
gatctatcattttcttggtcatttggcgtgaggtggtcaccgagtggcaataccttagca
tatgtaggccatagttctatgatttacttcgttgatgatgttggaccttctcctctggct
caaaatgttgcattccgtgatttgcctctccgtgatgtgttatttctgtctgaaagatta
cttataggcgtggggtttgattgcaatccaatggtgtttgcggcagatttacatggaata
tggcattttatcaaatttcttggggaaagaaaaacaacatcttcaggtccgaaatatggt
tcacagttttctgaagcattcggaaagctgtatggccaacaaaaacatggattgaacaat
gatgcaaatgaacattcaagatcacgaggacgtgtccatgagaactgcatcaattgtatc
gtgccgcttggagaaccagggagttctaaagtaacgcgcttcagcacatcaggattggat
ggaaaagtagttgtgtgggatatggagaaccaagcagatttatcggagtatttgtag
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