Malus sylvestris (European crab apple): 126583500
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Entry
126583500 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126583500
KO
K11790
denticleless
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126583500
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
126583500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_IFT140_1st
MIOS_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR75_2nd
WD_LRWD1
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
126583500
NCBI-ProteinID:
XP_050103828
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Position
9:1674553..1678830
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AA seq
512 aa
AA seq
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MEISKPQSFFQDIRARELQGFRARKRPCINALASDYYEVGAIAAEHNGPPMAISFGKTWK
SSHIVAMSDEDGYLSLFDTRRKFSASASHQENADKTRVCDWVAHQNTVFDICWIKDDTQI
MTASGDQTIKVWDIQEKKCTALLMGHTGSVKSLCPHPTNPEIIVSGSRDGSFALWDMRCN
SNSTNMQGELSIRSAAVVTGAHIFPRAKRVRRRKAVSMSITSVLYLKDEVSIATAGAVDS
IVKFWDTRSLKNAVTHTCPQPESTEKERRLHGITSLSQDLNGVFLSASCMDNSIYLYNVL
QLQKGAMQTFTGCQIETFFVKSVISPDAAHILSGSSDGNAYIWQVNKPQEDPIILKSHDR
EVTAVDWSQFEVGKIATSSDDFTVRIWNSQNSCSPSTSSPSTIRRRVMAIPSAECRKLLM
SESTKHTSKDSGNLCPSDQGLDKTNSLNPISMPKMSTPPSQKKQSTSDPDFSKTLEKTPE
AALDSPSSVLHAPSSLKRKTIRDYFGVPPLNL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggagatctcaaagccccaatcgttcttccaagacatcagagctcgagagcttcaagga
ttcagagctcggaagcggccgtgcatcaatgccctggcatcagattactacgaagtcggc
gccatcgctgcagagcacaacggccctccgatggcgatctcgtttggcaagacttggaaa
agctcgcacatagtcgccatgtccgacgaggatgggtacttgagtctgttcgatacacgt
cgcaagttctccgcatctgcatctcaccaagaaaacgcagataaaacgagggtttgcgat
tgggttgcgcatcaaaacactgtgttcgatatctgttggattaaggatgacactcaaatt
atgacagcttctggcgatcagactatcaaggtatgggatattcaggaaaagaaatgtact
gcattactgatggggcacacaggaagtgtgaaatctctatgtcctcatccaactaatccc
gagattattgtctctggttcgagagatggctcctttgctctttgggatatgagatgtaat
tcaaactctacaaatatgcagggggagctttctatacgctcagctgccgtggttacaggg
gctcatatttttccacgggcaaaacgtgtaaggcgcagaaaggctgtttccatgagcatc
acatcagttctttatcttaaggatgaggtctccattgctactgccggagctgtggacagc
attgtcaagttttgggataccagaagtttgaaaaatgctgtcacacatacatgccctcaa
ccggagtcaactgagaaggaaagacgattacatggtataactagcttatcccaagatcta
aatggagtgtttctttcagcttcatgcatggataacagcatttatttgtataatgtactt
cagctacaaaagggtgctatgcaaacgttcactggatgccagattgaaactttttttgtt
aagtcagttattagtcctgatgctgctcacatactcagtggctctagcgatggaaatgcc
tatatttggcaggtaaacaagcctcaggaagaccccattatattgaaaagccacgacagg
gaagttactgcagtggattggtcccagtttgaggtcgggaagattgcaacttcgtcagat
gattttacggttcgcatttggaactctcagaatagttgctccccaagcacaagctcacca
tctaccattcgaaggagagtcatggcaatcccaagtgcagagtgtagaaagcttctgatg
agtgaatcaacaaagcatacctcaaaggattccggaaatctgtgtccgtcagatcaagga
ttagataaaactaactcactcaacccgattagtatgcctaaaatgagtactcccccgtct
cagaagaaacaatctacgtcggatcctgactttagcaaaaccttggagaagacccccgaa
gctgcattggacagcccgtcttctgttctgcacgctccctcctctctaaaaaggaaaaca
attcgtgattactttggagtacctcccttgaacttgtag
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