Malus sylvestris (European crab apple): 126583509
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Entry
126583509 CDS
T09027
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msyl03036
]
126583509
Enzymes [BR:
msyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
126583509
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Meiosis-specific proteins
Others
126583509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
HHH_5
Cdd1
DNA_pol_lambd_f
AAA_22
IMS_HHH_1
HHH
Abhydrolase_9
Motif
Other DBs
NCBI-GeneID:
126583509
NCBI-ProteinID:
XP_050103840
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Position
9:1734781..1743395
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AA seq
1199 aa
AA seq
DB search
MDSYTLKSMSDLPAPFRSSFNFRYFNSLQSECFPVCFHSDTNMVVSAPTGSGKTVIFELC
ILRLLSRFLSEDGRLGRTNGTLKTIYIAPSKALVQEKVRDWNQKFGSWGITCLELTGDNE
SYNIRNIQEADIILTTPEKFDAVTRYRAKDGGMSFFSDIALLLIDEVHLLNDPRGAVLEA
IVSRIKMLAQNPELKSSSLAHVRFLAVSATIPNIEDLAEWLKVPVQGIKRFGEEMRPVKL
TTKVFGYTPAKNDFLFEKRLQNYIFDILMQYSRGKSALVFCSTRKGAQEAAQRLTQTVMA
FGHSNPFIKSREQQERLREASFSCGDKQMQSYIPYGVGYHNGGLSMKDRNLIESLFLKGD
IQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQMCGRAGRPPFDDTG
MVVIMTRKDTVHLYENLLNGCEMVESQLLSCLTEHLTAEIVQLTVSNIPRAIEWMKCSFL
YVRMKKNPVHYSVRKVISKDRIEKHMQEVCLQKVNELSQHQMIWTDKDGFLLKPLEPGRL
MTKYYLKFDTMKHIMQTPVNCSLEDALHVICRAEEISWIQLRRSEKKLLNDINADKDGRL
RFHALGDKGRRQKRIQTREEKTFVLANDCLTGDPSVHDLSLTQDMNSICSNGCRIARCMK
EFFIYQKNYKGALNSMLLAKSLYQKLWDDSPYLLKQLPGIGMVTAKALHSMGVRSFDTLA
EADPRRIEIVTGRKYPFGNHLKESLHSLPPKVEMKFEENECQRQGKLKLVVTLTRLSPTL
QPTKRHYADMIIGSEEDNLIVFHEKIRVEEFSSPYSATILLSNPQQGKLTVKADLVFEEY
IGIDLSQKLVLMKEGNNKRGKKPPSCPPPKEVCVIEDDAETIRQAPTKEHPKSTKSKRVD
GSMPSFNLLDDEFEEDEVAAKDEEEDCKIITHQTVFDHIREKAKNFPVLVASNGAHSAST
EPLVLTRKRAREKQIEPHREFEVLEELEWNKIPRRTAVNPSSKPKEAEQNQHNTNNLPTP
RSSATLNPMDDREAGLPLEPEDGTFKTARDETIFEHIRTKAKNFPVINKPKVVDSGYPTM
KEHPSKSRLEFSIDTTGTLKGTAKSNKVPRDTAFDSDSGTRKASNVSPRGLGDGAAKMLS
FDISMLKNTKKSPEPGSAGKRKHELSPLVPQRQWCSLTSAGKTREADTFLGFESIFSFL
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggattcgtatacactgaagtccatgtcagatttgcctgctccctttcgatcatcgttt
aattttaggtacttcaattctctgcagagcgaatgttttcctgtttgtttccactcagat
acaaacatggttgtgtcagcaccaactggaagcggtaaaacagtcatcttcgagctttgc
attctgaggctcctttcacgatttctctctgaggatgggaggcttggtcgtacaaatgga
actctcaaaacaatctatatagccccatcaaaggctttagtccaggagaaggttcgtgac
tggaaccagaagttcgggtcttgggggataacttgcttggagcttactggagataatgaa
tcttacaacatcaggaatatacaggaagcagacattatattaaccactcctgagaaattt
gatgcagtaaccaggtatcgtgcaaaggatggtggaatgagctttttcagtgatatagca
cttctacttattgatgaagttcatctgttgaatgatcctcgtggagcggttttggaggca
atagttagtagaataaaaatgcttgctcagaaccctgaattaaaatcaagctctctggct
cacgtacgttttctggctgtgtctgccaccattccaaatattgaggaccttgcggaatgg
ctcaaggttcctgtccagggaattaaaaggtttggagaagaaatgaggcctgtaaagttg
acaacaaaagtttttggttacacccccgcaaaaaatgattttctatttgaaaagcgcctt
caaaactacattttcgatatcctcatgcaatattcaagagggaaatccgctttggttttc
tgttcaactagaaaaggtgcacaagaagcagcacagaggctcacgcagacagtcatggcc
tttggccactcaaatccattcattaaaagcagagaacagcaagagaggctaagggaagct
tcattttcatgtggtgacaaacaaatgcaatcttatattccttacggtgttggttatcac
aacggtggcctttccatgaaggatcgtaacctcattgaaagtctttttcttaagggtgat
attcaagttttgtgcacaacaaatacccttgctcatggaatcaacctaccagcacataca
gtagttataaaatcaacacagcacttcaacaaagaaaaaggtctctacatggaatatgac
cggtctacaatactacagatgtgtgggagggctggccgaccaccatttgatgatacagga
atggttgtaatcatgacaagaaaagacacggttcacttgtacgaaaatctattgaatgga
tgcgagatggtggaatcacaattgctttcatgtttgacggagcatttaaccgctgagata
gttcaattgactgtctctaatattccaagggcaattgaatggatgaagtgctctttcttg
tacgtgagaatgaagaagaaccctgtgcactattcagttagaaaagtgatttctaaagac
cgtatagaaaagcatatgcaagaggtctgtctgcagaaagttaatgagttgtcacagcat
cagatgatatggacggataaggatggttttcttttgaaaccactagaacctgggaggctg
atgacaaaatactacttgaaatttgacacaatgaaacacattatgcagacacctgtaaac
tgcagtttggaagatgctcttcatgttatatgtcgagctgaggaaatttcatggatacaa
ctcagacgcagtgagaagaagcttttaaatgacataaatgctgataaagatggccgactt
cgctttcatgcccttggtgacaaagggaggcgacaaaagcgtattcagaccagagaagaa
aaaacatttgttctggctaatgactgcttgaccggtgatccttcggttcatgatctatcc
cttactcaggatatgaactctatatgctcaaatggctgtagaattgcaaggtgtatgaaa
gaattttttatttaccaaaagaactataagggagccttgaactcgatgcttctggcaaag
tcgttatatcaaaaactctgggatgacagcccatacctgctgaaacaattacccgggatt
ggaatggtgactgcaaaggcactacattcaatgggagtcagatcgttcgacacactggct
gaggctgatcctaggagaatagagatagtcactggtcgaaaatacccatttggaaaccat
ttaaaagagtctctacattcactacctccaaaagttgagatgaagttcgaagaaaatgag
tgtcagaggcaagggaaactgaagctcgtggtaacattgactaggctatcaccgacactc
caaccaaccaaacgacattatgctgatatgattattggttcagaagaggataacctgatt
gtctttcatgagaagataagagtggaggaattctccagcccctatagcgcaacaattctt
ctgtcgaatccccaacaaggaaagctcactgtaaaggctgatcttgtttttgaagaatac
atcggcattgatctctcccagaaacttgtattaatgaaggaaggcaataacaagcgggga
aaaaagccgccttcttgtcctccacctaaggaagtatgtgtcatagaggatgatgctgaa
actatacgtcaggctccaacgaaagagcatcccaaatcgaccaaatccaaaagggtagat
ggttccatgccgagtttcaacctcctggatgatgagttcgaagaagacgaggttgctgcc
aaagatgaagaggaggattgcaaaatcatcacacaccaaacggtatttgatcacatacgt
gaaaaggcaaagaacttccccgtcttggtggcatcaaatggtgcgcattctgcatccaca
gagcccttggttttgacaagaaagcgtgctcgtgagaagcagattgaaccccatagagaa
ttcgaggttctggaagagttagaatggaataaaattccaaggcggactgcggtgaatcca
tcttcaaaacccaaagaggcagaacaaaatcaacataacacgaacaatctccctactccc
agaagctcggctaccttgaacccgatggatgacagagaagctggtcttcctcttgaaccc
gaagatggaactttcaaaactgcaagagatgaaacaatatttgagcacattcgaacaaaa
gctaagaattttccggtgatcaataaaccgaaagtggtggattctggttatccaaccatg
aaagaacatccttccaagagtcgccttgaatttagtatcgatacgactggcacgctgaaa
ggaacagcaaagtcaaacaaagttccgagagacactgcattcgactcagattcgggaacc
agaaaagcatcaaatgtgtctcctagaggtttaggcgacggtgctgcaaaaatgctgtct
tttgatatctccatgttgaagaatacgaagaaatcaccggaaccaggcagtgctggcaag
aggaaacatgagctttctccgcttgtaccacaaaggcagtggtgctcgttgacatctgct
ggcaaaaccagggaagcagacacatttcttggatttgagagtatcttttcgttcctctga
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