Malus sylvestris (European crab apple): 126583518
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Entry
126583518 CDS
T09027
Name
(RefSeq) polygalacturonase At1g48100-like isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Module
msyl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126583518
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
126583518
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
126583518
NCBI-ProteinID:
XP_050103859
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Position
9:1806022..1808599
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AA seq
488 aa
AA seq
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MRTFNLKTLLFFVLIAFIISFSSFFEPCDAREGGNKQHWRKKQKGYGGDHRRAASRGDSY
ITTDETAVTLGKKSGGGSNVFNVLDYGAKGDGKADDTKAFEAAWAAACKVQASTISVPSG
SVFLVKPISFSGPNCEENIVFQLDGKIIAPTSSGDWGSGLLQWIEFTKLKGISIKGTGVI
DGQGSVWWNDSPKYNPANESTDSSLDDLQATESYSGKMPSTKPTALRFYGSDLVSVTGIT
LQNSPQAHLKFDACTNVQVSGISISSPGNSPNTDGIHLQNSQNAVISASSIACGDDCVSI
QTGCSNVYIHNVNCGPGHGVSIGGLGKDNTKACVSNVTVRDVKMHSTLTGVRIKTWQGGS
GSVQNIMFSNIQLTEVETPIMIDQFYCDKSKCQNQSSAVAISGVNYVNIQGTYTSKAVHF
ACSDSSPCTGVSLDTIELKSVDEGKHLYDPFCWEAYGVLKTSTVPRIDCLKKGKASTKAQ
SGSSGSSC
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgtttaacctaaaaaccctcttgttctttgttctcattgcgtttattatctcg
ttttcgagttttttcgaaccgtgtgatgctcgagagggaggcaataagcagcactggagg
aagaaacaaaagggttatggtggtgatcatcgccgcgctgcgtcgaggggagacagttac
atcacaacggacgaaactgcggtgacacttggaaaaaagagcggcgggggttcgaacgtg
tttaatgtgttggactatggtgctaaaggtgatggaaaagctgatgacaccaaggcgttc
gaggcggcgtgggcagcagcttgcaaagtgcaggcatcaactataagtgttccttccggg
tctgtgttccttgtcaaaccaatctctttctctggccctaactgcgaagaaaatatcgtg
tttcagttagatggtaaaatcatagctccaacaagctcaggggattggggttcaggtctt
ttacaatggattgaattcacaaaactaaaagggatttcgatcaaaggcaccggagtcatt
gatggacaaggctcggtttggtggaatgactcgccgaaatacaatcctgcaaacgaatca
acggatagcagtctcgatgatttgcaggccacagaaagttacagtgggaaaatgccaagc
accaaaccaacggctcttaggttctatggaagcgacctcgttagtgtcactggcataaca
cttcaaaacagccctcaggcgcacctcaagttcgacgcctgcacaaatgttcaggtttcc
ggtataagtatttcatccccgggcaacagccccaacacggatggaatccacctccaaaac
tcccaaaatgctgtcatttccgccagcagtatcgcctgtggagatgactgtgtatcgata
caaactggatgctcgaacgtatacatacacaacgtaaattgtggacctggacatggagtc
agcattggcgggctagggaaggacaacacgaaagcttgcgtttcgaacgtcactgtccga
gacgttaaaatgcacagtacactcacgggagtcagaataaagacctggcagggaggatcg
gggtctgtccaaaacataatgttctcaaacattcaactaacagaagttgaaaccccgatc
atgattgaccagttctactgcgacaagagcaagtgccaaaatcagagctccgctgtggcg
atttcgggtgtgaattacgtaaacatacaaggaacctacacgtcgaaggccgtgcatttc
gcatgcagtgacagctctccgtgcactggtgtgtctctggataccatagagttgaaatca
gttgacgaagggaagcacctgtacgaccctttctgttgggaggcgtacggagtgctcaaa
acaagcaccgttcctcgaatcgactgcttgaagaaggggaaggcgagcacaaaagctcaa
tccggaagtagcggttcttcttgctaa
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