Malus sylvestris (European crab apple): 126583545
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Entry
126583545 CDS
T09027
Name
(RefSeq) cyclic nucleotide-gated ion channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
126583545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msyl04040
]
126583545
Ion channels [BR:
msyl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
126583545
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
126583545
NCBI-ProteinID:
XP_050103916
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Position
9:complement(2134212..2138296)
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AA seq
713 aa
AA seq
DB search
MNRIIPTPAAKFRPLYTDPNSADVSSSAVPDEQNPLTILWNHQILDPDSDIVAHWNHIFL
VICILALFVDPLYFYLPWVGDTACLTTDNQLAVVVTCFRTLTDLFYLLHMIIKFRTAYVN
PSTRVFGRGDLVTDPHLIAIRYLKSDFIVDLAATLPVPQLVIWLVIPATRNSRADHANNT
LALFVLIQYIPRIFLIFPLNQRIIKTTGVVAKTAWAGAAYNLLLFVLAGHIVGSVWYISS
IGRQFSCWKSYCKEENSKRIVSCLTSFLDCSSTELPERKYWVNVTEVVKSCDANNEKAKF
KFGIFGDAFKSDVATTKDFYPKYLYCLWWGLRNLSSYGQTLKTSTYFWEIMFSITLCLTG
LILFSLLIGNMQTYLQSMSIKFEEWRIKLKDTEEWMRHRQLPEDLRERVRRFMQYKWFAT
RGVDEESILRSLPLDLCHEIQRHLCLSLVRRVPFFSQMDDQLLDAICERLVSSLSIQGTH
IVQEGDPVNEMLFIIRGKLESSTTNGGRSGFFNSITLGPGDFCGEELLTWALMPSSSLNL
PSSTRTVRALTEVEAFALRAEDLKFVAGQFKRLHSKKLQHAFRYYSHQWRTWGSCFIQAA
WRRFKKRKMTRDLAMQESLYYMQNPGQEEDGYYYYDEEQAGGNYEGDASGERSGENASNL
GQGQHLGVTFLASKFAATTRRGIAQKAQVVEAASPSLDMPRLLKPDEPDFSAD
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaataatccccacgccggccgctaaattccgccccctctacaccgaccctaac
tccgccgacgtctcctcctccgccgtgccggacgaacagaacccgctcacaatcctatgg
aaccaccaaatcctcgaccccgacagcgatatcgtagcgcattggaaccacatcttcctc
gtcatctgcattctggccctcttcgtcgaccccctctatttctacctcccttgggtcggc
gacacagcttgcttgaccaccgacaaccagctcgccgtcgtcgtcacctgcttccgcacc
ctcaccgacctcttctacctcctccacatgatcatcaagttccgcaccgcctatgtcaat
cccagcactagggttttcggccgcggtgacctcgtcacggacccccacctgattgccatc
cgctacttgaagtccgacttcattgtcgatcttgccgctacccttccggtcccccagctt
gtaatctggttggtgattccagcaacgaggaactcgagagctgatcatgccaacaacact
ctggcactgttcgttttgattcagtacattcctcggatcttcctcatcttcccgttgaat
caacgtatcataaagacaactggtgtcgtagcaaagactgcatgggcgggagctgcgtac
aatctcctcctcttcgttctagccggccatatagttggttctgtctggtatatatcgtcc
atagggcggcagttctcttgctggaaatcctattgtaaagaggagaactcgaaaaggatt
gtttcttgcctcacaagttttctagattgtagtagtacagaactaccagaacggaagtac
tgggtcaacgtcaccgaagttgttaaaagttgtgatgcaaataatgagaaagccaaattt
aagtttggaatttttggggatgctttcaagagtgatgttgctactacaaaggacttctat
ccaaagtacctgtattgtttgtggtggggtttaagaaacttaagttcatatgggcagact
ctgaagacgagcacgtacttttgggagataatgttttccattacactatgtctcactggt
ctaattctgttctcattattgattggcaacatgcagacttatctgcaatcaatgtcgata
aaattcgaagaatggaggattaagctaaaagatactgaggagtggatgaggcatcggcag
ttacctgaggatttgcgcgaacgtgttcgtagatttatgcagtacaaatggtttgccaca
agaggagttgatgaagaatccatattgcggtcattacctttagacctctgccatgaaatc
cagcggcacttatgcctttcgcttgttcgtcgtgttccttttttttcacaaatggatgat
cagcttctcgatgccatatgcgaacgtcttgtctcatccttgagtatccaaggcacacat
atagttcaagagggtgatccagtaaatgagatgttgtttatcattcgagggaaactcgag
agctccacaaccaatggagggaggtccgggttctttaactccatcactcttggacctggt
gacttctgcggcgaggaactgctgacatgggccttgatgccaagctctagtctcaacttg
ccttcttccacgcggacagtcagagctcttaccgaagttgaagcttttgcacttcgagca
gaggaccttaaattcgttgctgggcaattcaaacgccttcacagcaagaaactacagcat
gcctttaggtactattcccaccaatggaggacatggggttcttgctttatccaagccgct
tggagaaggtttaagaagcgaaagatgacgagggacttggctatgcaggagagcttgtac
tatatgcaaaatccaggccaagaggaagacggttactactactatgacgaagaacaagca
ggtggaaattatgagggtgatgcgagtggtgagagatcaggagagaatgcaagcaatttg
ggccaaggccaacatcttggggtcacatttctcgcttccaagtttgctgcaactacaagg
cgaggaattgcgcagaaagctcaggtggttgaagctgcttctcccagtttggacatgcct
cggttgttaaagccagatgaacctgatttctctgcagattga
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