Malus sylvestris (European crab apple): 126583657
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Entry
126583657 CDS
T09027
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msyl03000
]
126583657
03036 Chromosome and associated proteins [BR:
msyl03036
]
126583657
Transcription factors [BR:
msyl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
126583657
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
126583657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
POB3_N
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
CHDNT
Motif
Other DBs
NCBI-GeneID:
126583657
NCBI-ProteinID:
XP_050104084
LinkDB
All DBs
Position
9:complement(2997007..3008785)
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AA seq
642 aa
AA seq
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MTDGHLFNNISLGGRGGTNPGQLKIFSGGILWKKQGGGKAVEVDKADIVGVTWMKVPKTN
QLSVQIKDGLYYKFIGFRDQDVTSLTNYFQNTCGLTPAEKQLSVSGRNWGEVDLSGNMLT
FLVDSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDESHPPAQVFRDKIMSMADVGAGGEDAVTTFDSIAILTPRGRYSVELHLSFLRLQGAND
FKIQYSSVVRLFLLPRSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDLVYQTELTMSE
ELLNTKYKDKLELSYKGLMHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGV
LYPLEKSFFFLPKPPTLILHDQIDYVEFERHGAGGSNMHYFDLLIRLKSEQEHLFRNIQR
NEYHNLFDFISSKGLKIMNLGEGQAANGGVAPLLDDADDDAVDPHLVRVKNEAGDDESDE
EDEDFVIDKDDGGSPTDDSGEDDSDASESGGEKEKPAKKESRKEPSTSKVSSSKKQKTKD
AGEDGSKKKKQKKKKDPNAPKRAMSGFMFFSNMERDNVKRENPGIAFTDVGRVLGEKWKK
MSAEEKEPYEAKARQDKERYKDEISGYKNPQPMNIDSGNESD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggccacctcttcaacaatatctccctcggcggccgcggcggcacgaatccg
gggcagctaaaaatattttcaggagggattttatggaaaaaacagggagggggtaaagca
gtcgaggttgataaagctgacattgttggggtaacatggatgaaggtcccaaagactaac
caacttagtgttcagattaaggacgggttatactacaagttcattggatttcgtgaccag
gatgtcactagtttgaccaattattttcaaaatacatgtgggttaacaccggcagagaag
caactttctgtaagcggacgtaattggggagaagtcgatttaagcgggaatatgctgact
ttcttggttgactccaagcaagcatttgaggtatctttggctgatgtctcacaaacacaa
cttcaggggaaaaatgatgtcatcttagagttccacgtggatgatacgacaggagctaat
gagaaagattctttgatggaaataagctttcatatacctaactccaacactcaatttgtt
ggcgatgagagtcatcctcctgctcaggtttttcgtgacaaaatcatgtcaatggcagat
gttggtgctggaggtgaagatgctgttaccacatttgatagcattgcaatcctcacacca
aggggtcgctacagcgtggaacttcatctttcattcttgcggcttcaaggggctaatgat
ttcaaaattcagtacagcagtgttgttcgtctgtttctacttcctaggtctaaccagcct
catacctttgttgttgtcactcttgatcctcctatccgtaaaggccaaacattgtacccg
catattgttttgcagtttgaaactgaccttgtgtatcaaaccgaactgacaatgagtgaa
gaacttttgaacacgaaatacaaggacaagttagaactatcttataagggactaatgcat
gaagtgttcaccacaatattgcgtggcttgtctggtgccaaagttacgaaaccaggaaaa
ttccgcagctgtcaagatggttatgctgtcaaatcttcactgaaagctgaagatggagtt
ctatatcctcttgagaagagcttctttttcctaccaaaacctcccacccttattcttcac
gatcagattgactatgtggaatttgagaggcatggtgctggaggctcaaatatgcactat
tttgatcttctcatcagactcaaaagtgagcaagaacacctgttccgaaacattcagagg
aatgaatatcataatctttttgacttcatcagttcaaagggtctcaaaatcatgaactta
ggagagggccaagcagcaaatggtggtgtggctcctcttcttgatgacgcagatgatgat
gctgttgacccacatcttgttcgtgtgaagaatgaagctggtgatgatgagagtgatgaa
gaggatgaagattttgttattgacaaggacgatggaggttctcctactgatgactctggg
gaggatgattcagatgctagtgaaagtggaggtgaaaaagagaagcctgcaaaaaaggag
tctagaaaggaaccttcaacttccaaggtatcatcttcgaagaaacaaaaaaccaaagat
gcaggtgaagatggttcaaagaagaaaaaacagaagaagaaaaaggatccaaatgcgccg
aaaagagcaatgtctggttttatgttcttctcaaacatggagagagataatgtaaagaga
gagaaccctggaattgcatttactgatgtggggagagtactcggagagaagtggaaaaag
atgtcagcggaggaaaaggagccatatgaagcaaaggctcgtcaagataaagaacgctac
aaggatgaaatcagtggttacaagaacccccaacccatgaacatagattcggggaatgaa
tctgattga
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