Malus sylvestris (European crab apple): 126583663
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Entry
126583663 CDS
T09027
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126583663
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
126583663
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
126583663
NCBI-ProteinID:
XP_050104095
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Position
9:2992935..2995312
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AA seq
459 aa
AA seq
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MVLGPMASKLNLVLFMISFCMLVPSLKAETANDTLNIANFDAVWQERAMKAQKAALKAYQ
PNPEQVTEDFNESVEQTVVEEDLEDDQSAGNSTRRNLRGKHYKGPCKATNPIDRCWRCRA
NWANNRKKLASCVKGFGRKTRGGKKGAYYIVTDSSDDNVHDPKPGTLRHAVIQTQPLWII
FARSMVIRLSQELIVTSHKTIDARGANVHIAHGAGITLQFVQNVIIHGLRIHDTVPGSGG
MIRDSLSHIGIRTQSDGDGISIYGSSNIWLDHLSMWNCADGLIDAIQGSTAITISNCHFT
HHNDVMLFGASDAFAGDAIMQITVAFNHFGKGLIQRMPRCRWGFVHVVNNDYTHWIMYAI
GGSSHPTIISQGNRFIAPPNQAAKEVTKRDYAPESVWKSWQWRSEGDLMMNGAFFVQSGV
PNKKHGFGKLDMIKAKPGTFVRRLTRFAGSLNCKVGKKC
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggttcttggaccaatggcatcgaagctcaatttggtcctctttatgatttctttctgc
atgctggttccaagcttgaaggctgagacagcaaatgacaccctcaacattgctaacttc
gatgccgtatggcaggaacgagccatgaaagctcagaaggcagccctcaaggcctaccaa
cccaacccggaacaagtcaccgaggacttcaacgaaagcgttgaacagaccgtcgttgag
gaggaccttgaagatgatcagtctgccggtaacagcacaaggaggaatctgagaggaaaa
cattacaagggcccttgcaaggccacaaacccgatcgaccgctgctggcggtgccgggcc
aactgggctaacaaccgcaagaagctggccagctgcgtgaaaggctttggccgcaagacg
cgcggaggcaagaaaggggcttactacattgtcaccgactcttcggacgacaatgtccat
gaccctaagcccggaaccctacggcacgccgtgatccaaacgcaaccgttgtggatcata
tttgcacgcagcatggtcatcaggctgagccaagagctcatagtaacgagccacaagaca
attgacgcacgaggggcaaatgtgcacattgctcatggcgcagggatcacactccagttc
gttcagaacgtgattattcatggcctccgcatccacgacaccgtaccaggcagcggtggt
atgatcagggactccctgagtcacatcgggattcgcacacagagtgacggagatggtatc
tccatttacgggtcgtctaacatttggctcgaccatctttctatgtggaattgcgcggat
gggctcatcgacgccattcaagggtctactgctattaccatatccaactgccacttcacc
catcacaacgacgtgatgcttttcggggctagcgatgcgtttgcaggggatgcaatcatg
caaataacggttgcgtttaaccatttcggcaagggattgatacagagaatgccaagatgc
agatggggatttgtccatgtcgtgaacaatgactacacacattggatcatgtatgccatc
ggaggaagctctcaccccacaattatcagccagggcaaccgattcatcgccccaccaaac
caggctgcaaaagaagtgacgaagagagactatgcaccggagagcgtgtggaagagctgg
caatggagatcagaaggagatcttatgatgaatggagcattctttgttcagtctggagtg
ccgaacaagaagcatggatttggcaagttagacatgatcaaagcaaaaccaggcacattc
gtcagaaggctcacacgctttgcaggttctctcaactgcaaggttggcaagaagtgctag
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