Malus sylvestris (European crab apple): 126583664 Help Entry 126583664         CDS       T09027                                  Name (RefSeq) protein CLP1 homolog isoform X1   KO K14399   polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] Organism msyl  Malus sylvestris (European crab apple) Pathway msyl03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:msyl00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     126583664  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:msyl03019]     126583664 Enzymes [BR:msyl01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.1  Phosphotransferases with an alcohol group as acceptor     2.7.1.78  polynucleotide 5'-hydroxyl-kinase      126583664 Messenger RNA biogenesis [BR:msyl03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      126583664 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CLP1_P Clp1 CLP1_N nSTAND3 CbiA SRPRB AAA_24 AAA_22 ATP_bind_1 AAA_29 FtsK_SpoIIIE ABC_tran GTP_EFTU Motif Other DBs NCBI-GeneID:  126583664 NCBI-ProteinID:  XP_050104096 LinkDB All DBs Position 9:2879225..2912509 Genome browser AA seq 426 aa AA seqDB search MAHGGGPRQVKLDRESELRIEVGYDAPLKLRLLSGTAEIFGTELPPDFWLTFPPRLKFAV FTWNGATIEMEGSTETEYTADETPNISYVNVHAVLEERRHRAKPLPPDDLNSQGPRVIVV GPTDSGKSTLSKMLLSWAAKKGWKPTFVDLDIGQGAITIPGCIAATPIEMPIDPVEGIPL DIPLVYFYGHTTPSNNVDLYKVLVKELAQVVERQLSGNAESRASGMVINTMGWIEGQGYE LLLHAIDTFNANVVLVLGQEKLWSMIRNVLKNKPGVDVVKLQKSGGVVSRNAKFRQKSRS HRIREYFYGLANDLSPHSNISNFSDFSVFRIGGGPQAPRSALPIGAEPAADPTRLAPVNI NRDLLHTVLAVSFAKEPDQIISSNVAGFVFVTDVDIQRKTITYLAPSAGELPSKYLIAGT VTWLET NT seq 1281 nt NT seq  +upstreamnt  +downstreamnt atggcgcacggcggcggaccaaggcaggtgaaactggaccgagagagcgagctcagaatc gaagtcggctacgacgcccctctcaagctccgcctgctcagcggcaccgctgagatcttc ggcaccgagctcccccctgatttctggctcaccttcccgcccaggctcaaatttgctgtt tttacttggaacggagcaacaattgagatggagggcagtacggaaaccgagtacacggct gatgagactccaaatatcagctatgtgaatgtgcacgccgtactggaagaacggagacac cgcgctaaacccttgccgcccgatgacctcaattctcagggccctagggtgattgttgtg ggaccaacagattctgggaaaagtaccttgtcgaaaatgcttcttagttgggcagctaag aagggatggaaacctactttcgtcgacttggatattggacaaggagctataacaattccg ggatgtattgccgctactcctattgaaatgcctattgatccggttgaaggaattcctctt gatatacctctcgtttatttctatgggcacacaactcctagtaataatgtagatttatac aaagtgcttgtgaaggagcttgctcaagtggtagaaagacaactttctgggaatgctgaa tctcgagcttctggaatggtgatcaataccatgggatggatagaaggtcaaggctacgag ttgcttcttcatgcaattgatacattcaatgccaatgttgtcttagttctaggccaggaa aaactttggagcatgatcagaaatgtactaaagaacaagcctggtgtggacgttgtaaaa cttcaaaaatctgggggtgttgtatccaggaatgccaaattccgtcaaaaatccaggagt cataggataagggagtatttctatggccttgcaaatgatctcagcccacattctaatatt tcaaattttagtgacttttctgtctttcggattggtggcgggccacaggccccacgttcg gctttgccaattggtgcagagcctgccgcagaccctacgagattggcgcctgtgaatatt aaccgggatttgctgcataccgttcttgctgtttcatttgccaaggagcctgatcaaatt atttctagtaatgttgctgggtttgtctttgtcacagacgtcgacattcagaggaagaca attacgtaccttgcaccatcggcgggtgagcttccaagcaagtatttgattgcaggaacc gtgacatggcttgaaacgtga

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