Malus sylvestris (European crab apple): 126583981
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Entry
126583981 CDS
T09027
Name
(RefSeq) KH domain-containing protein HEN4-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126583981
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
126583981
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
Motif
Other DBs
NCBI-GeneID:
126583981
NCBI-ProteinID:
XP_050104500
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Position
9:complement(12859575..12864130)
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AA seq
623 aa
AA seq
DB search
MEAAALFRLLCPSSKTAALIPKLGSTPGAKVRIEHPTHGGDECVVLIFAEPNAQSPNNAA
QTLDKAERSPAQQALVRVFGKVTVDDAGEAEKGNSGGCGGLVCCRLLVASSQVGCVLGRG
GKIVEKIRQESGAHVRVLPRDQIPPCASPADELIQITGDFSAVKKALLSVSGCLQDNPKE
DVANSGATKISGGSIHGTGMPAQVDPIAHRGFGPGFNASDYHSRNYSSNPGTENIGRGHR
MAMEEEVVFKLLCHVDKVGSLIGKGGSIVRTMQSETGASIKIADCAPDSDERVVIISAQE
NPEQKYSPAQEAVIRAHHRIAEIGFEPGAAVVARLLVHPQQIGCLLGKGGFIITEMRRAT
GASIRIFPKEQVQKGSYQNDEVVQVIGSLPSVQDALFHITSRIRETIFPMRPPYANFSGP
PYMSPFPEMPPPSFRPRHNPASPGPYPSPGFHHGIDHSAFPSQTPDHQPSFSHGMDHNGP
AHMDRVPYSFGNERPGHGPTFESPSPRAWTPQGVSCGTPRGAADVGSGLASRNGSRRSSG
SQQPYLTSTTVEITIPQTLITHVHGENNGNLSQIRQISGAHVIVHDSKPGSLETLVVVSG
PPDKTRAAQTLIHGFILCGQTQL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgccgccctcttccgcctgctctgcccatcctccaaaaccgccgccctcatc
cccaaactgggctccacccccggcgccaaggtccggatcgaacacccaacccatggcggc
gacgagtgcgtcgtcctcatcttcgccgaaccaaatgcccaatcgcccaataacgccgcc
caaaccctagacaaggcagaaaggtcgcctgcccagcaagccctggttagggtgttcggg
aaggtaacggttgacgacgccggtgaagcagaaaagggtaatagcggcggctgcggcggc
ttggtgtgttgtaggttgctggtggcaagcagccaggttgggtgtgtgcttgggagaggg
ggcaagattgtggagaagattaggcaggagagtggagcccacgttagggttttgcccaga
gaccagattccgccgtgtgcatcccctgcagatgagttgattcagataacaggagacttt
tcagcagtgaagaaagcacttctgtctgtttcaggttgtcttcaggataaccctaaggaa
gatgtagctaactctggtgctaccaaaatttcagggggatcgattcacggaactggtatg
cctgcacaagttgaccctattgctcatcggggctttgggcctggctttaatgcgtcagat
tatcactcaaggaattattcttctaatcccgggactgaaaatattggacgtggtcacagg
atggctatggaagaagaggtggtattcaagttgctatgtcatgttgataaggttggcagt
ctgatagggaagggtggctccattgttcggactatgcaaagtgaaactggtgcatcaatt
aagattgctgattgtgcacctgattcagatgagcgggttgttatcatatctgcacaagag
aatccagagcaaaaatattccccggcacaggaagctgttattcgtgcacatcatcgaatt
gcagagattgggtttgaacctggtgctgcagtggttgctaggcttcttgtacatccacag
cagataggttgtttattgggtaaaggaggtttcattattacagaaatgagaagagctact
ggtgctagtatacgaatttttccaaaggaacaagtccagaagggtagctaccaaaatgat
gaagttgtacaggttattggaagcttgccttctgtacaggatgcactctttcatataaca
agtaggattcgggaaacaattttccctatgagacccccttatgctaatttcagtggcccg
ccctatatgtctccatttcccgagatgcctcccccctcctttagaccgaggcataaccca
gcctcccctggtccctatccttcacctggattccatcatggaattgatcattctgctttt
ccatcacaaactcctgatcatcagccttcattttctcatggtatggatcacaacggtcca
gctcacatggaccgagttccctattcttttggtaatgagcgaccaggacatggtccaaca
tttgagagtccttctccaagggcttggactccccagggagtaagctgtgggacccctaga
ggagctgctgatgttggttcaggcttggcttcaagaaatgggtctcgacgaagcagtgga
agtcaacaaccttacttaaccagcacaacagttgagatcacgattcctcagacgttgata
actcacgttcatggagagaacaacggtaatctgagccagatccggcagatctcaggcgca
catgtgattgttcacgattcaaaacctggatcgttggaaaccctggttgtcgtgtccgga
cctccagataaaacgcgtgctgctcagacccttattcatggtttcatcctttgtggccag
acacaactttga
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