Malus sylvestris (European crab apple): 126584181
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Entry
126584181 CDS
T09027
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126584181
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
126584181
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
126584181
NCBI-ProteinID:
XP_050104603
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Position
10:28582997..28588134
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AA seq
451 aa
AA seq
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MRACSKPTMAVSLNLFLLLLTMAVLLALVASTNASSKSDKNVNSRFVGPKESLSSKNSSM
AERSDEALDEHAVDNPDEIASMVDMTIRNSTERRNLGFFSCATGNPIDDCWRCDPQWQLH
RKRLANCGIGFGRNAVGGRDGRYYVVNDPGNDDPVNPRPGTLRHAVIQDRPLWIVFKRDM
VITLKQELIMNSFKTIDARGVNVHIAYGACITIQYITNVIIHGLHIHDCKSTGNALVRSS
PSHYGWRTMADGDGISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEV
MLLGHSDSYVRDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAE
PTINSQGNRYLAPNNAFAKEVTHRVDPNDWTHWNWRSEGDLMLNGAYFIASGTGSGASYA
RASSLGAKSSSLVGSITASAGVLSCRRGYQC
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagagcttgctctaaaccaacaatggcggtctctttgaacttgtttttgttacttttg
acaatggcggttcttctagctctggttgcaagcacaaatgcctcttcaaagagtgacaag
aatgtaaattctaggtttgtgggaccaaaggagtcattgagctccaagaactcatcaatg
gcagaaaggtctgatgaagctttggatgagcacgcagtagataatccagatgaaatagcc
tccatggttgacatgaccattcgtaatagcacagagagaagaaatttgggattcttttca
tgtgcgacggggaatccaattgatgattgttggagatgtgaccctcagtggcagctccac
cgcaagcgcctcgcaaactgcggcatagggttcgggcgcaatgccgtgggtggccgcgac
gggagatactacgtcgtgaacgaccccggcaatgatgatcccgtcaaccctagacccgga
accctccgccacgccgttatccaggacaggccgttgtggattgtgttcaagcgtgacatg
gtgatcacactaaagcaagagctaattatgaacagcttcaagacaattgatgcacgtgga
gtcaatgtgcacattgcatatggggcatgcattacgattcaatatattactaatgtcatc
atccatgggctacatatccatgactgcaaatctaccggaaatgccctggtccggagctcg
ccgagccattacgggtggaggacgatggcggacggggatggcatttccatttttggatct
agccacatttggattgaccacaattccctttctaattgtgccgatgggctcattgatgct
attatgggctctactgcaattaccatttccaacaactacttcacccatcataatgaggtt
atgttactgggtcacagtgactcctatgtaagggacaagcttatgcaagtgacaattgcc
tacaatcattttggagagggacttattcaaaggatgccaaggtgtaggcacgggtatttc
catgtggtgaacaatgactacacacattgggaaatgtatgccattggtggaagtgctgaa
cccacaattaacagccagggcaacagatatctggcccctaacaatgcttttgcaaaggag
gtcacacatagagttgatccaaatgactggacgcactggaactggagatcagaaggagac
ctgatgctcaatggagcctatttcattgcatcaggaactggttccggagcaagctatgcc
agggcctctagcttgggagccaagtcatcttccctggttggctccatcacggccagcgcc
ggtgtcctcagttgccggaggggttaccaatgttaa
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