Malus sylvestris (European crab apple): 126584446
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Entry
126584446 CDS
T09027
Name
(RefSeq) protein SHI RELATED SEQUENCE 1-like
KO
K27807
short internodes/stylish family transcription factor
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msyl03000
]
126584446
Transcription factors [BR:
msyl03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
126584446
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Gene cluster
GFIT
Motif
Pfam:
DUF702
HAM1_N
Motif
Other DBs
NCBI-GeneID:
126584446
NCBI-ProteinID:
XP_050104782
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Position
2:10426551..10429009
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AA seq
372 aa
AA seq
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MAGFFSLGRGGSDDQHNSNNPPPPDHHNHQQIAPETLFWYKNEDVANQPYKGFELLQQQE
QLLQLQTQPPPRLYQPHPHHHQDLYASAAALGVGPSSRGSDDTSSSRSAAAAFTMMRSSS
GGRGGSGGSGGGASCQDCGNQAKKDCIHMRCRTCCKNRGLDCPTHVKSTWVPASKRRERQ
QQLAALQHQHHQQQDHLQQHQNQQQQQLQVIRGESSKRLRENPSSNPSLRIHTNTNTSGL
DVVNFPPEVRSQAVFRCVKVSAMDDEVQYAYQTAVNIAGHWFKGILNDHGPESPNYNMNM
AAETSSGGGVNFQPLNLIAGATTAVNTASIDGGGGHEGMAVAGSTTVIDPSSLYPAPINT
YMGTQFFPPPRS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggctggttttttctcattaggcagaggcggcagcgacgaccagcataatagcaacaac
ccacccccgcctgatcaccacaaccaccaacaaattgctccggagacgttgttctggtac
aagaatgaggacgtggcaaatcagccgtacaagggcttcgagctgttgcagcaacaggag
cagctcctccagctccaaacccagccgcccccacggctttaccagcctcatccccaccac
catcaagatctctacgcttctgcggctgctctaggggtgggtcccagcagcaggggatcg
gatgacacttcatcgtcgaggtcggccgcagcggcgtttacgatgatgaggtcgtcgtca
ggaggaagaggaggaagcggaggaagcggaggtggcgccagctgtcaggactgcgggaac
caagcgaagaaagactgcatacacatgaggtgcaggacttgctgcaagaaccgagggtta
gactgtccgacccacgtcaagagcacgtgggttccggcgtcgaaacgccgtgagcggcag
cagcagctcgccgccttgcagcaccaacaccaccaacagcaagatcatttacaacaacac
cagaaccaacagcagcagcagcttcaagtgattcgtggagaaagttcgaaaagactcaga
gaaaatccgagctcgaatccctctcttcgtattcacacaaacacaaatacttcaggcttg
gatgtggtgaatttcccgccggaagtaagatcgcaggctgtatttcgctgcgtgaaagtg
agcgcaatggacgacgaggtccagtacgcgtaccagacggctgtgaacatcgcaggccat
tggtttaaaggaattctcaacgaccatggacccgaatcccctaactacaacatgaacatg
gcagctgaaacctcgtctggtggtggagttaatttccaaccgctcaatctcatcgcggga
gccaccaccgccgttaacacagcatccattgacggtggtggcggtcacgagggaatggca
gtggcgggttcgacgacagttatagatccttcttctctatatccagctccaattaacaca
tacatgggtacgcaattcttcccaccaccaagatcttga
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