KEGG   Malus sylvestris (European crab apple): 126584939
Entry
126584939         CDS       T09027                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
msyl  Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:msyl03016]
    126584939
Enzymes [BR:msyl01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     126584939
Transfer RNA biogenesis [BR:msyl03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    126584939
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf-CCCH zf_CCCH_4 zf-CCCH_2 DEAD_2
Other DBs
NCBI-GeneID: 126584939
NCBI-ProteinID: XP_050105266
LinkDB
Position
10:complement(7854620..7860293)
AA seq 676 aa
MDESPAETAPVPEARNGGSERTPEELVAKCIAPVKKQFLRPPPIRGLSNDQNDAVSEGKS
KASQTSVVKEKKSKRQLKRERQQAVKSAVGICPEVAKRGDVSRCPYKDKCRFSHDVEAYK
AQKPDDIEGECPFMTAQEACPYGLACRFLGSHKDGVEGGDVSAHRRSSEVNGLTKDVQRL
LWKNKMKFPKADAKLKALGLEGNAKSKIKILEDKEDDQVVSNNCDVTDGNGCSELPAEIG
EEGGLDGTCPDDESRPSKKTRSVIEEEICSGEVDDGGVSAAKEAAEQTSTAPEPEATVGI
VLPESDRSLRLHPRERKLIDFREKLYLAPLTTVGNLPFRRVSKVLGADITCGEMAMCTNL
LQGQASEWALLRRHSSEDLFGVQICGAYPDTVAHTVELIDQECQVDFIDINMGCPIDIVV
NKGAGSALLTKPMRMKGIVQAASGTVDCPITIKVRTAYFEGKNRIDSLIADMGNWGASAV
TIHGRSRQQRYSKLADWEYVYQCARKAPKALPVLGNGDIFSYVDWNKHKAECPELSTCMI
ARGALIKPWIFTEIKEQRHWDISSGERLNILKDYVRLGLEHWGSDTKGVETTRRFLLEWL
SYTCRYVPVGLLDVIPQRLNWRPPSYYGRDDLETLMASDSAADWVRISEMLLGKVPDGFT
FAPKHKSNSYDRAENG
NT seq 2031 nt   +upstreamnt  +downstreamnt
atggacgagtctcccgccgaaaccgccccggttcccgaggctaggaacggcggctctgag
cgaacgccggaggagctggtggccaagtgcatcgctcccgtgaagaaacagttccttcgc
cctcccccaatcagaggtctctctaacgaccagaacgacgccgtctcggaggggaaatca
aaggcttcccagactagtgtggtgaaggagaagaagtccaagcggcagctcaaacgcgaa
cgccaacaggcagtgaaatcggctgtaggcatctgcccggaggtggcgaaaagaggagat
gttagtcggtgcccgtacaaggacaaatgccggttcagccacgacgtagaagcttataaa
gctcagaaacctgacgacatcgagggtgagtgtcctttcatgactgcccaagaggcatgc
ccgtatggattggcatgtaggttcttgggttcgcataaagacggtgttgaaggtggagat
gtgagtgctcacaggagaagctccgaggtgaatggattgaccaaagacgttcaaaggctt
ttgtggaagaataaaatgaagttccccaaagcagatgccaaactcaaggctcttgggctc
gaggggaatgccaagtcaaaaataaagatattagaagataaggaggatgaccaggttgtt
tcaaataactgtgatgtcactgatggaaatggctgtagtgaattgcctgctgaaatagga
gaagagggtggccttgatggaacatgtccagatgatgaatctcggccttcgaagaagaca
agatctgtaattgaagaggagatttgctctggtgaagtagatgatggaggtgtaagtgct
gcaaaagaagctgctgagcagacctctacagcacctgaaccagaggctactgttggtatt
gtattaccagagagtgatagaagcctaagactacacccacgtgaaaggaagcttattgat
tttagagaaaagttgtaccttgcacctctgaccactgttggaaaccttccattccgaagg
gtttccaaagtgttaggagcagatataacatgtggtgaaatggcaatgtgcacaaatctt
ttgcagggtcaagcatcagaatgggcactgctgaggcgacattcatctgaggatttgttt
ggtgttcagatatgtggagcatatccagacactgtggctcacactgttgagctaattgat
caggaatgtcaagtggactttattgatataaatatggggtgcccaattgatattgttgtg
aacaagggtgctggctcagctcttcttacaaaacccatgcggatgaaaggcatcgtacaa
gccgcttctggtactgtggactgtcctataactattaaggtcaggacagcctattttgag
gggaaaaatcgcattgattcacttattgcggacatgggaaactggggagctagtgcagta
acaatacatggtcgatctcgacaacaacgctacagcaagcttgcagattgggaatatgtt
taccagtgtgccagaaaggcccctaaggctttgccagtacttggaaatggagacatattt
tcatatgtagattggaacaagcacaaggctgaatgccctgagctgtctacatgcatgatt
gctcgaggagcactaattaagccttggatttttactgaaataaaggagcagaggcactgg
gacatcagttctggggagcgattaaatatattgaaggattatgtacgtcttggccttgaa
cattggggctctgacacaaaaggtgtggagacaactaggcgttttctgttagaatggctt
agctacacttgtagatacgtacctgtgggtcttctagatgtcattccacaacggttgaac
tggcgcccgccatcctattatggccgtgatgaccttgagacactaatggcctctgattct
gcggctgattgggttaggatctctgagatgttgcttggcaaggttccagatggctttaca
tttgcaccaaagcacaaatccaattcttacgaccgagctgaaaacggttga

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