Malus sylvestris (European crab apple): 126585389
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Entry
126585389 CDS
T09027
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like isoform X1
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00510
N-Glycan biosynthesis
msyl00513
Various types of N-glycan biosynthesis
msyl01100
Metabolic pathways
msyl04141
Protein processing in endoplasmic reticulum
Module
msyl_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
126585389
00513 Various types of N-glycan biosynthesis
126585389
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126585389
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Gene cluster
GFIT
Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
HrpB1_HrpK
Enas
Motif
Other DBs
NCBI-GeneID:
126585389
NCBI-ProteinID:
XP_050105759
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Position
10:29894698..29910372
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AA seq
697 aa
AA seq
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MATGNLGGFLGLILAVSICHAAASVFHPISDSHRSAAAELFAPVDGSFGSLEEAYEALRS
FEVLGINKKSDIRTATCQSVVEKLRSSSSAPKDLFYALKVNGILECEVTNEVFEGIASRL
KTNVNGASSLLELYYSIGSLVLIKDQSPEVDVLLADAGGIFHSIKSLSQSDGRWRFSSDN
PEASTYAAGLALEALSGVIVLESSEVDQSKIGTLKSDILKLFDSIEKYDDGTIYFDEKVV
DLREHQSPLSTTASVIRGLTAFATVTSGNIKSLQIPGDKILGLAKFFLGIGIPGNAKDFF
NQIDSLASLESNKVSIPLVLSLPATVLSLTKKDLLQVKVNTVLGSSAPPLTVKLVKAFSS
GSKAASKIASQELKFDKESGSHFLDVLPESIDVGSYTFVFEVVLHDSEEENVYATGGSTQ
VQIFITGVIKIENAEIAVLDSDIGSIETQKKLNLAGGSTVSLSANHLQKLRLSFQLTTPS
GHAFKPHQVFLKLTHETKVEHIFVVGISGQKFEKILDFLGLVEKFFYLSGSYDIQLTVGD
AVMENSFLRAIGQIDLDLPEAPERASRPPSPAVDPYSKYGPKAEITHIFRVPEKRPSQEL
SLVFLGLVLLPLIGFLIGLLRLGVNLKNFPTSAVPATFGILFHVGIAAVLLLYVLFWLKL
DLFTTLKTLGLLGAFLLFVGHRILSHLASSSSKLKSA
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggctaccggaaacctcggcggatttctggggctgattttggcggtttcgatctgccat
gctgctgcttctgtcttccacccgatttccgactctcaccggtccgcggctgcggagcta
tttgcccccgtcgatggatcgttcgggagtttagaagaggcatacgaagccttaagatcg
tttgaggttcttgggattaataagaagtccgatatacggaccgctacttgtcagtctgtt
gttgaaaaactcaggtcatcgtcgtctgccccaaaggatttgttctacgccttaaaggtt
aacggcattttggaatgcgaggttacaaatgaagtatttgagggcattgcttcaagactt
aaaactaatgtcaatggtgcaagttcattgcttgagttgtactactcaattggaagcttg
gtacttattaaggatcaaagtcctgaagtcgatgtacttcttgctgatgctggtgggatt
ttccattctatcaagtctctcagccagagtgatggaaggtggcgcttcagttcagataat
cctgaggctagtacctatgctgctggattagctcttgaagcactttctggagttatcgta
ttagaatcttctgaagttgatcagtctaagattggtacattgaaaagtgatattttgaag
ctttttgacagtattgagaaatatgatgatgggaccatttactttgatgaaaaagttgtt
gatctgcgtgagcatcagagtcctctttcaactactgcatcagttattcgaggattaaca
gcatttgcaactgtgacatctggaaacataaagagtttgcagattccaggggacaagata
ttgggtctggcaaaattcttccttggaattggcattcctggcaatgctaaagactttttc
aaccaaatagactcattagcgtctttggaaagcaataaggtctctattcctttggtatta
tcacttccagctacagtgctttcattgaccaagaaagacctgctccaggtgaaagtgaat
accgtgcttggttcaagtgcaccacctctgacagttaagctggtgaaagcattcagttct
ggttcaaaagctgcgtccaaaattgcaagccaggaactcaagtttgacaaagaaagtggg
tcccatttcttggatgttctgccagaaagtatcgatgttggaagttacacatttgtcttt
gaggtggttctgcatgattctgaagaagaaaatgtttatgcaactggagggtctactcaa
gtacagatatttatcacaggagttatcaaaattgaaaatgcagagattgcagtactggat
agtgatattgggagcatagaaacccagaaaaaactaaatttagccggaggaagtactgtc
tcactatcagctaaccacctccaaaagctgcgtctatcctttcaattgaccactccttca
gggcatgcttttaagcctcatcaggtatttcttaagttgacacatgagaccaaggttgaa
catatctttgtggtgggaatctctggccaaaagtttgagaaaatactggattttctcgga
ttagtggagaagtttttctatctgtctggtagttatgacattcaactaactgttggtgat
gctgtaatggaaaactctttcttacgggctattggccagattgatttggatctaccagaa
gcacctgagagggcctcgcgccctccttctccagctgttgatccttactcaaagtatggg
cccaaagctgagataacccatatctttagggttccagaaaagcgtccttctcaggagctc
tctctcgttttcttgggcctcgtgcttttgccattgattggatttttgattggactatta
cgcttgggggtaaatctgaagaacttccccacttcagcagtacccgccaccttcggtatc
ctattccatgttggcatcgctgcagttcttttgctctatgtgctcttctggttgaagttg
gatctatttacgactctcaaaacgcttggattgttgggagccttcttgctgtttgtcgga
caccgaattctttcccacctggcctcttcgtcatccaagttgaaatctgcttga
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