Malus sylvestris (European crab apple): 126586052
Help
Entry
126586052 CDS
T09027
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A
KO
K11267
sister chromatid cohesion protein PDS5
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msyl03036
]
126586052
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
126586052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDS5
PTM_DIR17_Tudor
BNIP2
Motif
Other DBs
NCBI-GeneID:
126586052
NCBI-ProteinID:
XP_050106709
LinkDB
All DBs
Position
10:42956686..42969328
Genome browser
AA seq
1679 aa
AA seq
DB search
MTAPALPHEKMAQKLEQQLKEVGSKLETHHSSKDALVKLLKQAASCLSDLDQSPPASMLE
SMQPLLNAIVKPELLKHQDRDVKLLVATCICEITRITAPEAPYSDEVLKDIFHLIVGTFS
GLKDTSGPSFGRRVLILETLAKYRSCVVMLDLECDDLVNEMFSTFFAVARDDHQETVFSS
MQTIMIVLLEESEELRDDLLFIVLSILGRNRSDITVAARRLAMNVIEQCAGKLESGIKQF
LISSMSGDNKSENHQIDYHEVIYDVYRCAPQILSGIVPYLTGELLTDQLETRLKAVSLVG
DLFSLPGSTISKTFQPIFSEFLKRLTDRVVEVRMLVLQHVKSCMLSNPFRAEAPKIISAL
CDRLLDFEEKVRKQVVAVVYDVACHALNSIPLETIKLVAERLRDKSLLVKTYTMERLAEI
FRVYCAKCSDDPLLSSDFDWIPGKILRCFYDKDFRSDTIENVLCESLFPPNFSLKDKVKH
WVRVFSGFDKVEVKALEKILEQKQRLQQEMQKYLALKQMHQDGDAPEVQKKILYCFRVMS
RLFADPVKAEEGFQFLDQLKDVNIWKILTNLIDPNTGSQQACTLRDDLLRILGEKHQLYE
FLSTLSVKCSYLLFNKEHVKEILLEILVHKSTADMKYVQSCMNILAILARFSPLLLSGTG
EELANLLNDDDETIKEGVLNILARAGGIIREHLAVSSSSIDLVLERLCLEGSRRQAKYAV
HALAAITKDDGLKSLSVLYKRLVDMLEEKTHLPTVLQSLGCIAQTAMPVFETREKEIEEF
IVEKILKCNNKSGDNKNASWDDKSELCLLKIYGIKTLVKSYLPVKDAHVRSGIDGLLEIL
RNTLSCGEISKDIETSSVDKANLRLASAKAVLRLSKHWNHKIPVDIFYLTLKTSEISFPQ
AKKIFLDKVHQYIKDRLLDGKYACAFFFNTSGSKSAEFQEEKQNLADIIQMYHQTKTRHL
SVQQSDANSLTAYPEYILPYLVHALAHHSCPNIDECKDVKAFEPIYRQLHLFLSMLVHRD
DDVKSESSSNVEKEDISAIISIFQSIKCSEDIYDATKSKNSHGICDLGLSVTKLLFPKEN
DLQGLPASIPLPSMLYKPYEKKEGDDSVASEGQTWLADDSVLTHFESLKLESSETGLSEI
AEDELLKDGERDGGEVPLGKIIKRLRSQNSKAKRAKKNKASSTDAENAENSVDILKMVRD
INLDNLEKPSKFESSNGHENLPSKKSRMDLKHEKENKRKCTDATSVPVPKRRRSSSAHSA
FRSPRSTSKSPLSASLDDVDNRKLFQGTESDLLVSCFRKNATSSSQRKGRASDRGHNDEA
NEVGEASDREEPNVLKADKDDPNSDFNSPAGSIKKRKRKSIAGLAKCKFKESGKDVEDLI
GCRIKVWWPMDKRFYEGTVKSFDTLKRKHVILYEDGDVEVLRLEKERWELIDKGRKPTKK
LNSSKKSPSKEVSPGQKTKRAGGSRENKKPIKIVKRKRTPKKNSGGKKGVSKRNHWGSRD
KDSSEVSNDEPTLTSKVDEMDSGSSEENAEKVDENVTDEGESDVEVKSVSEGKQLKDAEE
SPHHTEESAEENPGSEGSPAEDMDTIPQDAENGNEEMQHSEEKEADELSGGSREVNEEDP
SDSEGIQEKDDISGSPLKQEKSHVEASSLSDAGDDELSDDEPLSKWTQRVVKKGSKPVR
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgcctgccctcccccacgaaaagatggcccaaaagctcgagcagcagctcaag
gaggtgggatcgaagctcgagacccatcattcttccaaagacgctctcgtcaagctctta
aagcaagctgcatcatgtctttcggacttggatcaatcacctccagcgtctatgttggag
tcaatgcagcctttacttaatgcaattgtcaagccagagctgttgaagcatcaagataga
gacgtcaagcttctagttgcaacctgtatttgtgagataactcgaattactgcacctgaa
gctccttatagtgatgaagtgctaaaggacatatttcacttgatcgtgggaacttttagt
ggattgaaagatacgagtggtccatcatttggtagaagagtactcattttggagactctt
gccaaatataggtcatgtgttgtaatgttagatcttgaatgtgatgatctggtgaatgaa
atgttcagtacattttttgcggttgccagagatgatcaccaagaaactgttttctcatcg
atgcaaacaattatgattgtgctcttagaagagagcgaggaattgcgagatgatcttttg
tttattgtattgtctatattaggtcgtaatagaagtgatatcactgtggctgctaggagg
cttgccatgaatgttatagaacagtgcgcaggaaagcttgaatctggcattaaacagttt
cttatatcatcaatgtcaggagacaacaagtctgagaatcatcagattgattaccatgaa
gtcatctatgatgtatatcgatgtgctccccaaatcttatcaggaattgtcccataccta
acaggagagttactgactgatcagctagaaactcgtttaaaagcggttagtttagttgga
gacctattttctctgccaggctctaccatctccaaaacctttcagccaatcttttcggag
ttcttgaagaggttgaccgatagagttgtggaggttcgcatgttggtcctccaacatgtc
aagagctgtatgctgtcaaatcctttcagagctgaagctcccaaaataatttctgccctc
tgtgaccggctattggactttgaagaaaaagtacggaagcaagttgttgctgtagtttat
gatgtggcatgtcatgccctgaattcaattccactagaaactataaaattggttgcagag
cgccttcgagataaatctctacttgttaaaacgtataccatggagaggctagctgagata
ttcagggtttattgcgcaaagtgctctgatgatccactcctatccagtgattttgattgg
attcctgggaagattctgagatgtttttatgacaaagatttcagatcggatacaattgaa
aatgttctgtgtgagtccctgttccctccaaatttttccctcaaagataaagttaaacat
tgggtcagagtcttctcaggatttgataaagttgaggtgaaggctcttgagaagattcta
gagcagaaacaaaggttacaacaagagatgcagaagtatctggcacttaagcagatgcat
caggatggtgatgctcctgaggtccaaaaaaaaattctctactgttttcgtgtaatgtca
cggttgtttgctgaccctgttaaggctgaagagggttttcaatttcttgatcaactgaaa
gacgttaacatctggaagattttaacaaatcttattgatccaaacactggctcccagcaa
gcttgcactttacgggatgatttgcttaggattctgggtgaaaaacaccaactgtatgaa
tttcttagcactctctcagtgaagtgttcttatctacttttcaacaaagagcatgtgaag
gaaattcttctggagattcttgtacacaaatctactgcagatatgaaatatgtgcaatct
tgcatgaatattttggcgattcttgcacgctttagtccattattactcagtgggacagga
gaagaactagcaaatttgcttaacgacgatgatgaaacaataaaagaaggggttctgaat
attttagctagggctggtggtatcatccgggagcatcttgcagtgtcatcaagttccata
gaccttgtattggaaaggttgtgcttggagggcagtcgaagacaggcaaagtatgctgta
catgcccttgcagcgataacaaaggacgatggacttaaatcactctctgttttatacaag
aggcttgtggatatgctggaggagaagacacatttgcctactgtactacaatctttgggg
tgtatagctcagactgcaatgccagtttttgaaactagagagaaggaaattgaagagttt
atagttgaaaagatcctaaagtgcaataataaatcaggcgacaataaaaatgcatcttgg
gatgacaaaagtgagctttgtttgctaaagatatacgggataaagacattagtgaaaagt
tatttgcctgtcaaagatgctcatgttcgctctggcattgatggtctgctggaaatctta
agaaacacactttcttgtggagaaatatcaaaagacatagaaacaagttcagttgacaag
gcgaatttgaggcttgcttctgcaaaggcggttcttcgtctgtccaagcactggaatcat
aagatacctgttgatatcttctacttaaccttgaagacttcggagataagtttccctcaa
gctaagaaaattttcctggacaaagttcatcaatacataaaggaccggcttttagatgga
aaatatgcttgtgcattcttttttaacacatctggatcaaagtcagcagagtttcaagag
gagaaacagaatctcgcagacattattcaaatgtatcaccaaacaaagacacggcatctc
tccgtgcagcaatctgatgctaattcattgactgcttatccggagtacatcctcccatac
ttagttcatgcccttgcacatcattcttgtcctaatattgatgaatgcaaggatgtgaaa
gcatttgagccgatataccggcaattgcacttatttctgtctatgttggtgcatagagat
gatgatgtcaagtcagaatctagtagcaacgttgaaaaggaggacatttctgctataatc
tctatctttcaaagtatcaagtgctctgaagatatatatgatgcaacaaagtcaaagaat
tcacatggtatttgtgaccttgggctgtcagttaccaaactcttattcccaaaggagaat
gatttacaaggattgccagcatcaattcctctgccttcaatgttgtacaaaccatatgag
aagaaagaaggagatgactctgtggccagcgaagggcaaacatggttggcagatgacagt
gtgctgactcactttgaatctcttaagttagagtctagtgaaacgggactttcagagatt
gctgaagatgagcttctgaaagatggtgaaagagatggaggtgaagtgcctttaggaaaa
attataaagcgcttaagatctcaaaattcaaaggctaaaagggcgaaaaagaacaaagca
tcatcaacggatgcagagaatgctgaaaatagtgttgatatattgaaaatggtcagggac
ataaatttggataatttggaaaaaccttctaagtttgagtcaagcaatggtcatgaaaat
cttccaagcaagaaatcaagaatggatctaaagcacgaaaaggaaaacaaaagaaaatgt
actgatgcaacatctgtccccgttcctaaacgtaggaggtcgtcatccgctcacagtgct
ttcagatcacctagaagcacttccaagtctcctctaagtgcttcactagacgatgtagac
aatagaaaactgtttcaaggcaccgagtcagatttgttggtttcatgcttccggaagaat
gctacctcttcgtcacaacgtaaaggcagagcctctgaccgtggtcataatgatgaggca
aatgaagttggagaagccagtgaccgtgaggagcctaatgtactgaaggctgacaaggat
gacccaaatagtgatttcaactctcctgcaggatccatcaagaagcggaaaagaaagagt
attgccggtttggcaaagtgcaaattcaaggaaagtggaaaagatgttgaggacttgatt
ggttgcagaataaaagtttggtggccaatggataagcgattttatgaaggcacagtgaag
tcatttgatacgttaaagaggaagcatgtgatactatatgaagatggagatgtagaagta
cttcggttagaaaaggaacggtgggagctcattgacaaaggtcgcaagcccacaaagaag
ttaaattcgtcaaagaaatccccctcaaaagaagtgtcccctggtcaaaagactaagcgt
gcaggtggttcgcgtgagaacaaaaaaccaattaaaatagttaaaaggaaaagaacacca
aagaaaaactcgggcgggaagaagggcgtatcaaaaagaaatcattggggaagtagggac
aaagatagttctgaagtttcaaatgatgagcccacccttacatctaaagttgatgaaatg
gactcaggtagttcagaagagaatgctgaaaaagtggatgagaacgtgacagatgagggg
gaatctgacgtggaagtgaaatctgtttctgaaggaaaacagttaaaagatgcagaagaa
agcccacatcataccgaggaatctgctgaagagaatcctggttccgaagggagccctgct
gaagacatggacactatcccacaagatgcagaaaatggaaatgaggagatgcaacactca
gaagagaaagaagcagatgaactaagtggagggtcaagagaggttaacgaggaagatccg
tcagattctgaagggattcaagaaaaagatgatatttctggcagtcccttgaaacaggag
aaatcccatgtagaggcttcaagtctttctgatgctggggatgacgaactttctgatgat
gagcctcttagcaagtggacgcaacgagtagtgaaaaaaggttcgaagccagtgcgataa
DBGET
integrated database retrieval system
