Malus sylvestris (European crab apple): 126586130
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Entry
126586130 CDS
T09027
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126586130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126586130
Membrane trafficking [BR:
msyl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
126586130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
126586130
NCBI-ProteinID:
XP_050106789
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Position
10:1603595..1610133
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AA seq
567 aa
AA seq
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MVLVSAVRDYLSRMLQDISGMKVLILDSHTVSTVSVAYSQSELLQKEVFLVELVDSISKS
RESMSHLKAVYFLAPTSENIQYLRRHLVAPRFGEYHLFFSNILKDTQIHILADSDEHEVV
QQLQEFYADFVATDPYHFTLNVPSNHMYMLPAVVDHSNLQCFCDRVVDGIAAVFLALKRR
PVIRYQRTSDIAKRIAQETAKLMYQQESGLFDFRRTEISPLLLVIDRRDDPVTPLLNQWT
YQAMVHELIGIQDNKVDLQNIGKFPKDQQEVVLSSEQDAFFKKNMYENFGDIGMNIKQLV
DEFQQISKSNQNIQTIEDMAKFVDNYPEYRKMHGNVSKHVALVTEMSKLVEERKLMVVSQ
TEQELACNGGQVAAFEAVTNLLNNESVSDIDRLRLVMLYALRYEKESPVQLMQLFNKLSS
KSRKYKPGLVQFLLKQAGVDKRTGDLFGNRDFLNIARNMARGLKGVENVYTQHQPLLFQT
MESISKGRLRDVDYPFVGNHFQQGRPQDVVIFIVGGTTYEESRCVALQNAMNTGIRFILG
GSVILNSKRFLKDLEEAQRLARTSNAI
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggtctcggccgtacgggattacctgagtcggatgttgcaggacatctccggc
atgaaggttctcatcctcgattcccacacggtcagtacagtcagcgtggcgtattcgcaa
tccgagcttcttcagaaggaagtgtttctggtggaattggtagactccatttccaagtcc
agagaatccatgtctcacctcaaagccgtctacttcctcgcacccacttcagagaatata
cagtatttgcgccggcacttggttgctcctcgatttggagagtatcacctctttttctcc
aacatattgaaggatacccagattcatattttagctgattcagatgagcatgaagttgtg
caacaacttcaggagttctatgcagactttgttgcaactgatccttaccattttactttg
aatgtgccatcaaatcacatgtatatgctcccagcagttgtggatcattcaaatttacag
tgcttctgtgatcgagtagttgatggaattgcagctgtttttttggcattaaaacgaaga
ccagttattcgttatcaaagaacatctgatattgcaaaaaggattgcgcaggaaacagca
aagctaatgtaccagcaggaaagcggactttttgatttcagacgaacagaaatttctcca
ttattgctggtaattgataggagggatgatcctgtgaccccgttgctgaatcagtggacc
tatcaggcaatggttcatgaattgattggtattcaagacaacaaagtcgacttacaaaac
attggaaaatttccaaaggatcaacaggaggttgtgctgtcatcagaacaagatgctttt
ttcaaaaagaacatgtatgagaactttggtgatattgggatgaacatcaagcagttggtt
gatgaatttcagcaaatttcaaaaagtaaccagaacatccagacgatagaggacatggcc
aagtttgttgacaattaccctgagtacagaaaaatgcacggaaatgtttcaaagcatgtg
gcactggtaacagaaatgagtaagctagttgaagagcgaaaacttatggtagtttcacag
acagaacaggagttggcttgcaatggtgggcaggtggcggcttttgaggcggtgacaaat
ctattaaacaatgaaagcgtatctgatattgaccgcctacgacttgtcatgctgtatgcc
ttacgctatgagaaggagagtcctgtgcaactaatgcaattatttaacaaactgtcatcc
aagtctcgcaagtacaagcctgggcttgtccagtttctcttgaagcaagcgggtgtggat
aagcgaaccggggatctttttggaaatcgagatttcttaaacattgcacgtaacatggct
cgtgggctgaagggggttgagaatgtgtacacacagcaccagcctcttctcttccaaact
atggaaagcatcagcaagggacggctgagagatgtggattatccatttgtgggaaatcat
ttccagcagggcaggcctcaagatgtggtcattttcattgttggggggacaacttacgag
gagtctcgttgtgtagctttacaaaatgctatgaatactggaattcgctttatacttggt
ggttctgtgattctcaattctaaaaggttcttgaaggacttggaagaagctcagagacta
gctcgtactagcaacgccatctga
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