Malus sylvestris (European crab apple): 126586340
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Entry
126586340 CDS
T09027
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like
KO
K04523
ubiquilin
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126586340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126586340
03051 Proteasome [BR:
msyl03051
]
126586340
Membrane trafficking [BR:
msyl04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
126586340
Proteasome [BR:
msyl03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
126586340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
UBA_7
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TPR_Slam
UBA_HOIP
Motif
Other DBs
NCBI-GeneID:
126586340
NCBI-ProteinID:
XP_050107119
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All DBs
Position
10:24677387..24681198
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AA seq
549 aa
AA seq
DB search
MGGEGDSSEPKVGGEGEGGEQINIRCSNGSKFSVRASLDSTVGAFKEVLAQNCDTPADQQ
RLIYKGRILKDDQTLTSYGLQADHTVHMVRAFAAPASTPAPLAAKAATASPTTAPGVTRG
VGSEGLQSPDLGASLLFGQGLNPLGGGGGGQGLFGAGLPEFEQVQQQLTQNPNMMRDIMN
MPAIQSLMNNPDLMRGLIMNNPQMRDIIDRNPELAHILNDPGILRQTLEAARNPELMREM
MRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTGNAGNDLGSNPFSALLGNQGGAQ
ARDGSNNPSTTGSETAAGSAAPNANPLPNPWGIAGGGNQPNTTRTNPVGDGRAASIAGLG
GLGLPGMEQMLGGMTDANAMNQLLQNPAISQMMQSMLSNPQYMNQILSLNPQLREMVDLN
PQLREMMQNPELLRQLMNPETMQQMLALQQSLFSPNRQQPTQDPTLTGGATGAPNNAGLE
MLMNMFGGLGAGGLAAANPNVPPEELYENQLRQLREMGFFDTQENIRALQATSGNVHAAV
ERLLGNPGV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcgagggcgattcgagcgagcctaaagtcggtggcgaaggagaaggaggagag
cagattaacattcgatgctcgaatggctccaagttttcggtgagggcgagcctggactcg
actgttggggcattcaaggaagttttggctcagaattgcgatactccagctgatcagcag
aggttaatttacaaaggtcgtattttgaaggacgaccagaccctcactagttatggtctg
caggcagatcatactgttcacatggtccgtgcctttgctgcacctgcgtcaacccccgct
ccccttgctgctaaagctgctactgctagtcctaccactgctccaggtgttacacgcggt
gttggtagtgaggggcttcagagtcctgaccttggggcatctttgttatttgggcagggt
ttaaacccacttggtggcggtggtggaggacagggtttatttggagctgggcttccagaa
tttgaacaagtgcagcaacaactgactcagaacccaaacatgatgagggacataatgaac
atgcctgccattcagagtttgatgaataaccctgatttgatgcgtggcttgatcatgaac
aatccgcaaatgcgtgatatcatagaccggaacccagagcttgcacatatacttaatgat
cctggcattctccggcagacattggaagccgcaaggaaccctgaactcatgcgtgagatg
atgcgaaacactgacagagcaatgagtaacattgaatcttcccctgagggattcaacatg
ctgaggcggatgtatgaaaacgttcaggagccatttttgaatgctacaaccggaaatgct
ggaaatgatttgggttcaaatcctttttctgctcttttgggaaaccagggtggggcacag
gccagggatgggtctaacaatccttcaaccactggttcagaaacagctgctggttctgct
gctcctaatgcaaatccacttcctaacccttggggcattgctggtggaggaaatcagcca
aatactacgaggacaaatcctgttggggatggaagggccgccagtattgctggcctggga
gggcttggtctccccggaatggaacagatgcttggtggcatgacagatgctaatgcaatg
aatcagcttttgcagaatccagccatatcacagatgatgcaaagcatgctttccaatccc
cagtacatgaatcagattctgagcctcaatccacaactacgcgaaatggttgatttaaat
cctcaacttagggaaatgatgcaaaatccagagctactaaggcagttaatgaaccctgaa
acaatgcagcaaatgctcgcgttacagcagtcactattttctcccaatcgacaacaacca
actcaggatccaactctgaccggtggtgctacaggtgcccctaataatgccggtttggag
atgctgatgaacatgtttggaggtcttggagccggcggcttggccgctgcaaaccctaac
gtaccaccggaagaactgtatgaaaatcagctgaggcagctacgagaaatgggtttcttc
gatacccaagagaatatcagggcattgcaagccacttctgggaatgtccatgctgcggta
gagcgacttttagggaatcctggggtgtaa
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