KEGG   Malus sylvestris (European crab apple): 126586344
Entry
126586344         CDS       T09027                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126586344
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msyl03019]
    126586344
   03041 Spliceosome [BR:msyl03041]
    126586344
Messenger RNA biogenesis [BR:msyl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     126586344
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     126586344
Spliceosome [BR:msyl03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    126586344
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8
Other DBs
NCBI-GeneID: 126586344
NCBI-ProteinID: XP_050107124
LinkDB
Position
10:complement(38435114..38438321)
AA seq 379 aa
MDFSKKRKTEPNGTVSTSPPSQSAYLTPEDARRLLQPLTQDQLIGILQNAVVRHPDVLES
VRSVADQDSTLRKLFIRGLGADTTSDSLRSLFSAFGELDEAIVIHDKATGKSKGYGFVTF
KHADSALLSLKEPSKKIDGRVTVTQFASAGLATSFNSSNPNAADVSARKIYVGSVPFDIS
SDRLLSAFSAYGEIEEGPLGFDKVTGKSKGFAFFVYKAEQGARAALVEPLKNIDGHQVAC
KLAVDNKKSKPGGAQGTPDNSGVRPPQSSMPPGMYQGLPPQTGPYSGFPGGHQPLPVPSG
NNFSGARYNPNLGGGYGMPPPGEFGARLPPSSIGMGPGGYSDDPHYGLGSSMAHPSQHQQ
PPMPRIPPGGLYQGMPPYY
NT seq 1140 nt   +upstreamnt  +downstreamnt
atggacttctcaaagaagcgcaaaaccgagccaaacggcaccgtttcgacttctccacct
tcccaatccgcctatctaactcccgaagacgcccggaggctcctccagcccctgactcag
gaccaactcatcggcatcctccaaaacgccgtcgttcgccaccccgacgtactcgaatcc
gtccgctccgtcgccgaccaggactccaccctccggaagctcttcatccgtggcctcggc
gccgacaccacctccgactccctccgctccctcttctccgccttcggcgagctcgacgag
gccatcgtcatccacgacaaggccactggaaaatcaaaaggctacggcttcgtcacgttc
aagcacgccgactcggccctcctgtcccttaaagaaccgagcaagaaaatcgacggcaga
gtcaccgtcacgcagttcgcctccgccggattagcgacgtcgtttaacagcagcaacccc
aacgccgctgacgtctcggccaggaagatttacgtggggagcgtcccgtttgatatctct
tcggacagactgttgtcggctttctcggcgtatggagagattgaggaagggccgctaggg
tttgataaggtcaccggaaaatcaaaggggtttgctttcttcgtgtacaaggcggagcag
ggagccagggctgcgcttgttgaaccgttgaagaacatcgacggtcatcaggtggcttgc
aaattggcggtagataacaagaagagcaaacctggtggggcacaaggtactcctgataat
tctggtgttcggccaccgcaatcttccatgcctccgggaatgtatcagggcctgccgcct
cagacaggtccttattcgggttttccaggtgggcatcagccgctgccggtgccttctggt
aataattttagtggtgccaggtataatccgaatttgggaggtggatatggtatgccaccg
ccaggagaatttggagctcgattgccgccaagttctattggaatgggtcctggaggatac
tcagatgatccacattatggtttaggatcgtccatggcgcatccttctcagcatcaacag
cctcctatgcctcgaattccgcctggtggactgtaccagggcatgccgccttactactga

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