Malus sylvestris (European crab apple): 126586368
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Entry
126586368 CDS
T09027
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1-like
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126586368
Membrane trafficking [BR:
msyl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
126586368
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
126586368
NCBI-ProteinID:
XP_050107160
LinkDB
All DBs
Position
10:32952002..32967352
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AA seq
1833 aa
AA seq
DB search
MLSLRPRRDSTPYSTKWQNKFEENLEQWPHLKELVQCYTTDWVKDDNKYGHYESIGLPSF
QNQIYEGPDTDIETEMHLASARQTKVEDTTDDDVPSTSGRQFSEATVSDSVQSNDPKHFG
QSPLPAYEPAFDWENERSMIFGQRIPETPISHGLKISVKVLSLSFQAGLAEPFYGTMCLY
NRERREKLSEDFYFRHAPTEKQDISFEPRGIFYLDAPSSSVCLLIQLEKHATEEGGVTPS
VYSRKEPVHLTEKEKQKLQVWSQIMPYRESFAWAIVSLFDNSIGAASGGSASPSSPLAHS
ISGTSSHDGVFEPSAKVTLDGKLGYPSRSSVVVEISNLNKVKECYTEDSLQDPKRKIHKP
VKGVMRLEIEKHQNDHDDMENISESGSVTNDSIDDRITDSTFGKLPSNGLDGPQGSSSKW
NSSDTKERSGNGSNAHGNSIPSVDDFQAFDFRTTTRNQPFLQLFHWLYVYPMTVSLSRKR
NLFIRVELREDDNDIRRQPLEAMHPRDPGASLQKWVHTQVTVGARVACYHDEIKLSLPAT
WTPTHHLLFTFFHVDLQTKLEAPKPVVIGYAALPLSTHAQCRSEISLPIMRELVPHYLQD
MGRERLDYLEDGKNIFRLRLRLCSSLYPINERIRDFFLEYDRHTLRTSAPWGSELLEAIN
SLKNVDSIALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNIVTRVQQESVDDAERNHF
LVNYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVK
SMVLEKMRLFYHNLPLGEDIPPMQLKEGVFRCIMQLYDCLLTEVHERCKKGLSLAKRLNS
SLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQLVLHDCKLTFLQIICDHDLFVEMPGR
DPSDRNYLSSVLIQELFLTWDHDDLSLRAKAARILVVLLCKHEFDARYQKPEDKLYIAQL
YFPLIGQILDEMPVFYNLNAVEKREVLVAILQIVRNLDDSSLVKAWQLSIARTRLFFKLM
EECLVLFEHRKPADSTLMGSSSRSPVGGDAPASPKYSDRLSPAINNYLSEASRQEVRPQG
TPENGYSWQRVNSQLSSPSQPYSLREALAQAQSSRIGASSQALRESLHPILRQKLELWEE
NLSASVSLQVLEITEKFSIMAASHSIATDYGKFDCVTAIFMSFFSRNQPLSFWRSLLPVF
NGVFNLHGVTLMARENDRFLKQVTFHLLRLAVFRNDNIKKRAVIGLQMLMRSSFYYFMQT
ARLRVMLIITLSELMSEVQVTQMKADGTLEESGEARRLRKSLEEVADEAKSPSLLRECGV
PDGALLEIPEKMTENRWSWSEVKFLADSLLLALDASLEHALLGSLITMDRYAAAESFYRL
AMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGIVMQALVARNDGVWSKDHIT
ALRKICPMVSIEISSETTAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELFHFCASILE
LVIPVYKSRRAYGQLSKCHTMLTNIYESILEQESSPIPFTDATYYRVGFYGNRFGKLDRK
EYVYREPRDVRLGDIMEKLSHVYESRMDGNHTLHIIPDSRHVKADELQPGVCYLQITAVD
PVMEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVLQTE
GSFPALVNRLLVTKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQSLQR
ILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLI
GEEDQEFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcctgcggcctcgccgcgattccactccgtactccaccaaatggcagaacaag
tttgaggagaatttggagcagtggccacatctgaaggagctggtgcagtgctacacaaca
gactgggtgaaggacgacaacaagtatggtcactacgagagtattggactgccctcattc
cagaaccagatttatgagggccctgacactgacattgaaactgaaatgcatcttgcaagt
gcaaggcaaaccaaggtggaagatactactgatgatgacgtccccagtacctcgggacga
caattctcagaagctactgtatcggattcagtacagtccaatgatccaaagcattttggt
caatctccccttcctgcttatgaaccagcatttgattgggaaaatgaaaggtcaatgata
ttcggacaaaggattccagaaactccaatatctcatggattgaagatctcagtgaaggtt
ctttccctgtcatttcaagcgggattagctgagccattttatggtacaatgtgcttatac
aatagggagagaagagaaaaattgtcagaggacttttattttcgacatgcaccaactgaa
aagcaggatatttcttttgaacctcgcggaatcttctatttagatgctccatcatcatca
gtttgtctgctaatccagttagagaagcatgccacagaagaaggcggggttacaccttca
gtttattcgcgcaaagaaccagtacacttgactgagaaagaaaagcaaaaactgcaggtg
tggtctcaaataatgccttacagagagtcctttgcctgggctattgtttcattatttgat
aacagcattggtgcagcttctggtgggtctgcttccccaagtagtcctcttgctcatagt
atatctggtacaagttctcatgatggtgtgtttgagcctagtgcaaaggtcacattagat
gggaagctaggatatccaagtcgaagctctgttgttgtcgaaatatcgaacttaaataaa
gttaaagaatgctatactgaggactcacttcaggatcccaaacgtaagattcataaacct
gtgaaaggtgttatgaggctggaaatcgagaagcaccagaatgaccatgatgacatggaa
aatatatcagaaagtggtagtgtgactaatgattctattgatgaccgcattaccgattcc
acatttgggaagctcccaagtaatggtttggatggtcctcagggtagcagctctaagtgg
aattcttccgacaccaaagaaagatctggaaatggatcaaatgctcatggaaattcaatt
cccagtgttgacgattttcaagcttttgacttccgtacgacgacaagaaatcagcctttc
ttgcagctttttcattggctttatgtatatcctatgactgttagtttgagtcggaagagg
aatttgttcataagggttgagcttcgggaggatgataatgatattcgtagacagcctctg
gaggcaatgcatccaagggatccaggtgcatcactccagaagtgggttcacacacaagtg
actgttggtgctagggtggcctgctaccatgatgaaatcaaactctccctacctgctacc
tggacaccgacacatcatcttttatttactttttttcatgtagatcttcaaacaaaattg
gaagctccaaaacctgtagtaattggatatgcggcacttccattatctactcatgctcag
tgtaggtctgaaatttctttgccaattatgagagagctggttccacattatctccaggat
atgggcagagagaggttggattatttggaagatggaaagaatatctttcgattgcgctta
agactttgttcgtcgctgtatcctatcaatgagcggataagagatttttttcttgaatac
gataggcacactcttcgaacaagtgcaccttggggttctgagcttttggaggctattaac
agtttgaagaatgttgattccattgctttgcttcagtttctacatccaattttgaatatg
cttctgcatctaataggaaatggtggagaaaccctccaggttgcagctttcagagccatg
gtcaatattgtcacccgggtgcagcaagagtcagttgacgatgctgaaagaaaccatttc
ctagttaactacgtagattacgcttttgatgattttgggggtcggcaaccaccagtttat
cctggcttgtcaactgtttggggaagtttggctcgtagtaaggctaaaggatatcgtgtt
ggacctgtgtatgatgatgttttggcaatggcttggtttttccttgagctaattgtcaag
tcaatggtgttagagaagatgcgtcttttctatcataatcttcctttaggtgaagatatt
cctcctatgcagttgaaagaaggtgtattcagatgtataatgcagttatatgattgccta
ctaacagaagtgcatgaacgttgtaagaagggattaagcttagcaaagcgtttaaacagc
agtttagctttcttttgttatgacctcttgtccatcattgaacctcgccaagtttttgaa
ttggtgtctttgtacctggacaagttttccggggtttgtcaattggttcttcatgattgc
aagctcacatttctacaaattatatgcgatcacgacctttttgtggaaatgcctgggaga
gacccttctgacaggaattacctttcgtctgttttaatacaagagctatttcttacatgg
gatcatgacgatttgtctctgcgggcaaaggcagctagaattttagtagtccttttgtgc
aaacatgagtttgatgcacgataccaaaagccagaagataaactatatatagcccagctc
tattttccacttatcggacagattcttgatgaaatgcctgtattttacaacctcaatgct
gttgaaaagcgtgaagttttggtcgcaattttgcaaattgtacggaaccttgatgattca
tcacttgtcaaggcgtggcagctgagcattgccagaactagattgtttttcaaactcatg
gaggaatgccttgttctatttgagcacagaaaacctgctgatagcacgcttatgggatct
agttctcgcagtcctgttggtggcgatgcccctgcttcccctaagtattctgatagactt
tcccctgcgatcaacaactatctgtctgaagcatctagacaagaagtcagacctcagggt
actccagaaaatggttattcgtggcagagagtaaattctcagttaagctcccctagccag
ccgtattccttgagagaagcactagctcaggcacaatcttctagaattggagcttcttct
caagcgttaagagaatctttgcatccaatattgagacaaaaattggagctctgggaagaa
aacttgagtgcttctgtcagtcttcaggttttggaaataactgagaagttctccataatg
gcagcatcccacagcatcgccactgactatggaaaatttgactgcgtcacagccatattt
atgagcttcttctctcgaaatcaacctttgtctttctggagatcattgcttcctgtcttc
aacggtgtcttcaatcttcatggtgtaactttgatggctagggaaaatgaccgcttttta
aagcaagtaacttttcatcttcttcgacttgcagttttccgaaatgataatatcaaaaaa
agggctgttattgggctccaaatgcttatgaggagttctttctattactttatgcaaaca
gcaaggttgagggtcatgctgatcatcacattgtctgagttgatgtctgaagtacaagtg
actcagatgaaggctgatggaacactagaagagagtggtgaagcacggcgtcttcgaaag
tcacttgaggaagtggcagatgaagctaagagcccgagtctattgagagagtgtggagtt
cctgacggtgctctgttagaaattccagaaaaaatgacagaaaatagatggtcctggtca
gaagtgaaatttctcgctgacagtcttcttcttgctcttgatgccagcttggaacatgca
ctcctgggctctttgataactatggatagatatgcagctgccgaaagcttctatagactt
gctatggcatttgcccctgtcccagaccttcacataatgtggttactgcatttatgtgat
gcacatcaggaaatgcagtcttgggctgaagctgctcagtgtgctgttgctgtggccggt
attgtaatgcaggcccttgttgctagaaatgatggtgtttggagcaaagatcacataact
gctttacgtaaaatttgtccaatggtcagcattgagatcagctctgagacaactgcagct
gaggtagagggatatggtgcatcaaaacttaccgttgactctgctgtgaagtacctacaa
ctcgcaaataagttgttttctcaagctgaactctttcatttctgtgcaagcatactggaa
cttgttattccagtttataaaagccggcgggcgtatggacaactgagtaaatgtcacaca
atgcttaccaatatctatgaatcaatccttgagcaggagtcaagtccaattccattcact
gatgcaacatactatagggtgggcttttacggtaacagatttggaaagttggatagaaag
gaatatgtatacagggagccccgcgatgtaaggctaggtgacataatggagaaacttagt
cacgtatacgaatctaggatggatggcaatcacaccttacacattattccagattctagg
catgtgaaggcggatgaattgcagcctggagtctgctacctgcagataacagctgttgat
ccggtcatggaagacgaggatttgggaagtagacgggagagaatcttttcgctttcaact
ggaagtgttcgtgcacgagtctttgatcgtttcttgtttgataccccatttacgaagaat
ggaaagactcaaggtgggttggaggaccagtggaagaggcggaccgttcttcaaactgaa
ggttcattcccagctcttgtgaataggctattagttaccaaatccgaatcgcttgagttc
tccccagtagaaaatgccattggaatgattgaaactcggacagctgctttacgaaatgaa
cttgaagagcctcgcagttctgaaggggatcaacttccacgtctccagagcctacaaaga
attcttcaaggcagtgttgccgtccaggtcaacagtggggtactgagcgtgtgcactgca
ttcctatcaggcgagcctgcaacaagattgcggtcccaggaactgcagcaactgattgct
gcactcctcgaatttatggccgtatgcaagcgtgcaatccgtgtgcacttcagattgatc
ggtgaggaagatcaggagttccacactcaactcgtgaatggatttcaatctctgacggcc
gagttgtcccattacatcccagccattctgtcagagctgtga
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integrated database retrieval system
