Malus sylvestris (European crab apple): 126586401
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Entry
126586401 CDS
T09027
Name
(RefSeq) structural maintenance of chromosomes protein 1-like
KO
K06636
structural maintenance of chromosome 1
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msyl03036
]
126586401
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
126586401
Meiosis-specific proteins
Cohesin complex and associated proteins
126586401
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
TMF_TATA_bd
MIP-T3_C
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
126586401
NCBI-ProteinID:
XP_050107197
LinkDB
All DBs
Position
10:30097650..30107252
Genome browser
AA seq
1218 aa
AA seq
DB search
MPSLVSQGKILRLELENFKSYKGFQTIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTG
HLRGAQLKDLIYAFDDKEKDQKGRRAFVRLVYQLDNGAELQFTRAITGGAGSEYRIDGAS
VTWEEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKRDYEKY
EEEKSEAEQKASLVYQRKRTIVLERRQKKEQKEEAEKHLRLQDQLKSLKKEHSLWQLFNI
EKDIAKMTEELEAEKKSREQVMQEIDEFQLEANNKKKEQAKYLKEIAQCEKKISDRNNKL
DKSQPDLLKLKEEMSRINAKIKKSEKELAKKEQERKRHKEDIKQLQKGIHDLTAKLEDLH
EKGRDSGDKLKLDDTELREYFRIKEDAGMKTAKLRDEKEVLDRQQHADLEAQKNLEENLQ
QLRSREAELEEQEEQMLTRQKKIKENSAKHRDEAKNLDNELRAMQSKNSQARTKYENLKS
KIDEIEKQLRELKADRYENERDSRLSQAVETLKRLFHGVHGRMTELCRPTQKKYNLAVTV
AMGKFMDAVVVEDEQTGKECIKYLKEQRLPPQTFIPLQSVRVKPVMERLRNLGGTAKLIF
DVVQFDPALEKAILFAVGNTLVCDELDEAKRLSWTGERFKVVTVDGILLAKSGTMTGGTS
GGMEARSKQWDDKKVEGLKKKKEQFESELEELGSIREMQIKESETTGRISGLQKKIQYAE
IEKKSIKDKLATLAREKQNIKEEIDRSSPELLKLKQAVDKRSKEINKLEKRINEIVDRIY
KDFSRSVGVANIREYEENQLKASQYMAEERLSLSSQLSKLKYQLEYEQNRDMESRINELQ
DSISKFKKALERVQKEEAAAKSAAEKASDEIDRWKEEIQEWKSKSEGCEKEIQEWNKRGS
TATTSLSKLNRQIHAKESQIEQLMSQKQEIVEKCELEQINLPIISDPMETDSSTMGPFLD
FSQLNKSHVRDRRPSEREKLEVEFKQKMDAVISEIEKTAPNLKALDQYEAIKEKERAVTE
EFEVARIEEKEKADLFNSVKQKRYELFMDAFQHISSSIDKIYKQLTKSNTHPLGGTAYLN
LENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSFRPSPFFILDEVD
AALDNLNVAKVAGFIRSKSREGARANQDDEGGGGFQSIVISLKDSFYDKADALVGVYRDC
ERSCSETLTFDLTKYRES
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccctggtctctcagggaaaaatcctccgcctggagctcgagaacttcaagtcc
tataagggcttccagaccatcggccccttctacgacttcacggcgattattgggcccaat
ggcgctggaaagtccaacctcatggacgccataagcttcgtcctcggcgtgcggacgggc
cacctccgtggggcccagctgaaggacctgatctatgccttcgacgacaaggagaaggac
cagaagggccgcagggcctttgtccggttggtttaccagctggacaacggggcggagctc
cagttcacccgagccattacaggcggagcgggcagcgagtaccgtatcgatggggcgtct
gtgacgtgggaagagtacaatgcgaagctcaggtctctcgggattcttgtcaaggcccgg
aatttcctcgtctttcagggtgatgtggagtccattgcctccaaaaatcccaaggaactc
actgcacttcttgagcagatctctgggtctgatgaactcaagagagactatgaaaaatat
gaagaagaaaaatccgaagctgaacaaaaagcaagtcttgtttatcagagaaagagaaca
atagtattggagaggaggcaaaagaaagaacaaaaagaagaagccgagaaacacctccgc
ctgcaagatcaactgaaatctttgaagaaagaacattctttatggcaattgttcaacata
gaaaaggatattgcaaaaatgactgaggaacttgaagctgaaaagaaaagccgtgaacaa
gttatgcaagaaattgatgaatttcagctagaagcaaacaataagaagaaagaacaagca
aaatatctgaaagagattgcacaatgtgaaaagaagatttcagatagaaataataaactt
gacaaaagtcaaccagaccttctgaaactgaaagaggaaatgtctcgtataaatgcaaaa
atcaagaaaagtgagaaggagctcgctaagaaagaacaagaaaggaaaagacataaagag
gatataaagcagctccagaagggcatacatgatttgactgcaaaactagaggatttacat
gaaaaaggccgagatagtggcgacaaactgaagttagatgatactgaattaagggaatat
tttcgaatcaaggaagatgctggaatgaaaactgcaaagctaagagatgagaaagaggtt
ctggataggcaacaacatgctgatcttgaagctcaaaagaatttggaagaaaatcttcaa
cagttgagaagtcgcgaggctgaattagaggaacaagaggaacaaatgctaacaaggcag
aaaaaaattaaagaaaattctgcgaaacatagggatgaagctaaaaatctggataatgaa
ctgcgtgccatgcaatctaaaaattcacaggccagaacaaaatatgaaaatctgaagtca
aaaattgatgaaatagaaaagcaactacgggaattgaaggctgacagatatgagaatgag
agagattccagattgtctcaggcagtcgagactctcaaacgcctgtttcacggtgtccac
ggtcgtatgactgaactttgtaggccaacacaaaaaaagtataacctcgctgttactgtt
gccatgggtaaatttatggatgcagttgtagttgaggatgaacaaacaggaaaggaatgc
atcaagtatttgaaagaacaaaggcttcctcctcagacattcatacctcttcagtctgtt
cgtgtgaagcccgtaatggagagattgcgcaatttaggtggtactgcaaagctgatcttt
gatgtagtacaatttgatcctgccttggagaaggcaattctttttgcggttggcaatact
cttgtctgtgatgaacttgatgaggctaagcgtctcagctggactggtgagaggttcaaa
gttgtaactgttgatggaattctgctcgcgaaatccggcacaatgactggcggtaccagt
ggtggaatggaagcaaggtcaaaacagtgggatgataaaaaagttgaaggactgaagaag
aagaaagaacagtttgagtcagagttggaagagctggggtcaattagagagatgcagata
aaagagtctgagacaactggtagaattagtggacttcaaaaaaagatccagtatgcagag
attgagaagaaaagcattaaggacaaacttgcaaccttggcgcgggaaaagcagaatata
aaagaagagattgatcgcagcagtcctgaacttctcaagttaaagcaagctgtagataag
cgaagcaaggaaatcaataagcttgagaagaggataaatgaaattgttgacagaatttac
aaagattttagtagatctgttggggtggcaaacatccgtgagtacgaggaaaatcaactc
aaggcttcccaatatatggctgaagagaggcttagtttgagtagccagctttcaaagttg
aagtaccagttagagtatgagcaaaaccgggacatggaatcacgaattaacgaactccaa
gattctattagtaaatttaaaaaagctttagaacgggttcagaaggaagaggctgcagcc
aagtcagcagcagaaaaagcttctgatgagatcgatcgttggaaggaagaaatacaagaa
tggaaatccaagtcagaagggtgtgagaaggaaatccaagaatggaacaagcggggttct
acagctacaacaagtttatccaaacttaatcgacagatacatgctaaggagtcgcagatt
gagcagctgatgtcacagaagcaggaaatagtagagaaatgtgaattggaacaaataaac
cttcccatcatctcagacccaatggagactgattcctccacaatgggcccatttttggat
tttagtcagttaaacaagtctcatgtgcgggacagaaggccatctgaacgggagaagctt
gaggtggaatttaagcaaaaaatggatgccgtaatttcagaaattgaaaaaacagctcca
aatttgaaggccctggaccaatatgaggctattaaagaaaaggaaagagctgtaactgaa
gagtttgaagtggctagaatagaagagaaggaaaaagctgatctgtttaactccgttaag
cagaagaggtacgagttgtttatggatgccttccaacatatttccagtagtattgataag
atatacaaacaactcacgaagagcaacacacatccactgggtgggacggcatacttaaat
ttggaaaatgaagatgatccatttttacatggcatcaagtacactgctatgcccccaaca
aagcgctttcgtgatatggaacaattatctggcggcgagaaaaccgttgctgcattggca
ttactcttttccatacacagttttaggccttcaccgtttttcatactggatgaagtcgat
gctgcactagataacttgaatgttgccaaggttgctggattcatccgttcaaagtcacgt
gaaggagccagggctaaccaagatgatgagggaggaggtggttttcagagcattgtaatt
tctctaaaagatagcttctacgacaaggctgatgctttagttggggtttacagggactgc
gaaaggagctgttcggaaactctgacatttgacctgaccaagtatcgggagtcgtga
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