Malus sylvestris (European crab apple): 126586411
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Entry
126586411 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126586411
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
126586411
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
126586411
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
DUF4340
Motif
Other DBs
NCBI-GeneID:
126586411
NCBI-ProteinID:
XP_050107211
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Position
10:complement(42029740..42033249)
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AA seq
596 aa
AA seq
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MDNLLDVKSNETNRGYWDINWSLPGGQNRYEPLKGAEYSVVHHSNDSLEVSFKNTFIPSS
ANGVKLPLSVDIRYIVKTGVSGFYNYAIYERPSGCPAFDLAQTRMAFKLRREKFHYMAIT
DEKQRIMPMPEDVLPPRGKQLIVPESVLLVDPINPDLKGEVDDKYQYSMDNKDSGVHGWI
SSGPTVGFWLIFPSQEFRNGGPTKQNLTVHTGPFCLAMLHGTHYIGEDILAHFEEGETWT
KVFGPFFVYLNSTPDVSKAHDLWIDAKKQRLIEETLWPYAFVQSPYYVAAKERGSVSGRL
FVQDRYVSDSLIPAKYAYVGLSVATTPGSWQTESKDYQFWIQTDIIGNFTIKNVIPGVYG
LHGWIPGFVGDYLDNERITISPGTQTQLGNLTYVPLRDGPTLWEIGYPDRTAIDYYVPDV
NPIYVNKLFLNSPEKYRQYGLWDRYTDVHPEFDQTFTIGSSNPKTDWFFAHVDRRGADNK
YLPTTWTIKFNLKSVTTGTHKFRLAIASATRSDLKVHVNAMDIEHLVIQVLNLGTDNAVC
RHGVHGLYRLFSGDIPSTLLVKGDNSIFLSQARGGDALCGLFYDYLRLEAPETAES
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcttttagatgtcaagtcaaatgaaaccaacagaggatattgggatatcaac
tggagtttgccaggaggccaaaacagatatgaaccactcaaaggagctgaatatagtgtt
gttcatcatagcaatgacagcttagaagtttcattcaagaacaccttcattccatcatcc
gctaacggagtcaaattgccgctaagtgtggatataaggtacattgtaaagactggtgtt
tcaggcttctacaattacgcaatatatgagcggccttctggatgtcctgccttcgatctt
gctcagacaaggatggcgtttaaactgcgaagagagaagttccactacatggcaataaca
gatgagaaacaaaggataatgccaatgcctgaggatgtgcttccaccaagaggcaaacaa
ctaatcgtgcctgaatcagttttgcttgtagatcccatcaatcctgatctcaaaggcgag
gttgatgataagtatcagtactcgatggacaacaaagacagtggagttcatggatggata
agttccggccccactgtagggttttggctcatctttcccagccaggagttccgaaatggc
ggtcctacgaaacaaaatctcaccgtccacactggtccattctgccttgctatgcttcat
ggaactcattatatcggcgaagatatattagctcatttcgaagaaggggagacttggaca
aaagtgtttggcccctttttcgtataccttaactcaaccccagatgtatcaaaggcacac
gatttatggattgatgcgaaaaaacagaggctgattgaagagacattgtggccttatgct
tttgttcaatcgccctactatgttgccgctaaagagcgtggttcagtttcaggaagattg
tttgtccaggataggtatgtttcggattctctcattcctgctaaatacgcgtatgttggt
ctatcagttgcaactactccaggatcctggcaaacagaaagcaaggactatcagttttgg
atacaaacagatatcatcgggaatttcaccatcaagaatgttatccctggagtatacgga
ctccatggctggattccgggttttgtaggtgattaccttgacaacgaacgtatcacaatc
tctccaggaacacaaacacaactcggaaacctgacctatgttcccctcagagacggtcca
actttatgggagattggctaccctgataggacggccatagattactatgttcctgatgtg
aacccaatatacgtgaacaagctgtttctgaacagccccgagaagtatagacagtatggc
ttgtgggacagatacactgatgtgcaccctgaatttgatcagaccttcactataggcagc
agtaatccgaaaaccgactggttttttgctcatgtggacaggaggggagcagataataaa
taccttccaacaacatggacaataaagttcaatctcaaatctgtaacgaccggcacacac
aagttcagactggccatcgcttcagcaacccgctcggacctgaaggttcatgttaatgct
atggacatagaacacctggtgattcaagttttgaacttggggacggataacgcagtttgt
cgacatggagttcatggactctatcggcttttcagcggcgatatcccatcaacgctcctg
gtaaagggagataactccatatttctttcacaggctaggggtggtgatgcactttgtgga
cttttctatgattatctaagactggaggctccggaaacagcagagagttga
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