Malus sylvestris (European crab apple): 126586520
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Entry
126586520 CDS
T09027
Name
(RefSeq) KH domain-containing protein HEN4-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126586520
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
126586520
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GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
TetR_C_43
Motif
Other DBs
NCBI-GeneID:
126586520
NCBI-ProteinID:
XP_050107330
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All DBs
Position
10:6968907..6982387
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AA seq
654 aa
AA seq
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MGSTFFSLPAKRSLSTTMSSDSNPNFEKGPSKRSRPPPPLSVPPAHVAFRMLCHASRIGG
VIGKSGSVIKQLQQATGAKIRIEEPHVESPDRVVVVIAPSKIGSKIWLRTPVLNNVYNGG
GGGVEEEIEVSKAQEALLRVFERILEVAAETGAIAAGVGVVSCRVLAEAAQVGSVIGKGG
KVVEKIRKETGCKIRVLNEKLPACAAATDEMIEIEGDILAVKKALIAVSGCLQECPPVDK
TRMSVSRPEAVPRETLPDLRLDHLSQRNSMLNLASNSMSYVSGVRPSSREAERIPTLETK
QQEVSFRILCANDKIGGVIGRGGSIVRALQNETGAAISVAASVAECDERLITVSASENPE
SRYSPAQKAAVLVFSRSVEAGIEKGRDSSSNKGSPLTARLVVSSNQVGCLLGKGGVIVSE
IRKATGTGIRIVGGDQVPKCALENDEVVQISGDFSNVQDALYNITGRLRDNLFSSTVSNP
GRRSNSSMLTDTSPYGRLKDPNPIGYQPSSSVGITCGLSRHSTLIQNMDHLGLSHSLDHP
SPPRPWASQMSAFTDVGRGLTSLKSGTDIGSSGSKSAIVTNTTVEIIVPENVIGSVYGEN
GANLARLRQISSAKVIVHEPRPGTTDRIIVISGTPDETQAAQSLLHAFILTGPS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcacctttttctctctaccagcgaagcgttccctatcgacgacaatgtcttct
gattccaaccccaacttcgaaaagggaccctccaagcgctccaggccccctcctcccctc
agcgtccctcccgcccacgtcgccttccgcatgctctgccacgcctcgcgcatcggcggc
gtcatcggaaagtccggtagcgtgatcaagcagctccagcaagccaccggagccaagatc
cgaatcgaagaaccccatgtcgaatcccctgaccgggtcgtcgtggttatcgctcctagc
aaaatcggctccaagatttggctgagaactccagttctaaacaatgtctataacggtggc
ggcggtggtgttgaagaggagattgaggtttccaaggcgcaggaggcgcttctgagagtg
ttcgagaggattctggaagttgcggcggagacgggggcgattgcggcgggggttggggtg
gtttcgtgccgggttttggcggaggcggcgcaggtcgggtcagtgatagggaaggggggg
aaggtggtagagaagattaggaaagaaactgggtgtaaaattagggttttgaatgagaag
ctacctgcttgtgctgctgccactgacgagatgatcgagatagaaggggatattttggct
gtaaagaaagcacttattgctgtttctggctgtcttcaagaatgtccaccagttgacaag
acaaggatgagtgtaagcaggcctgaggcagttcctcgtgagactctacctgatctgcgt
ttagatcatctttcacagaggaactcaatgcttaatttggcaagcaactccatgagttat
gtttcaggagttcgtccatcatcaagagaggctgaaaggatccccacacttgagacaaaa
caacaggaagtttctttcaggattctttgtgccaatgataagattggtggtgtaattgga
agggggggttccattgttagggctcttcaaaatgagacaggtgctgcaataagtgttgct
gcctctgtggctgagtgcgatgaacgattaattactgtttctgcatcggagaatcctgaa
tcaaggtactcgccagcacaaaaggctgctgttcttgtcttctcaaggtccgtagaggca
ggcattgaaaaggggcgagactcaagctcaaataaagggtcaccccttactgcacggctt
gtagtttcatcaaaccaagttggttgtttgctgggaaaagggggtgtaatagtttcagag
atccggaaggcaactggcactggtatacgaatagtagggggtgaccaggtccccaagtgt
gccttagagaatgatgaagttgtacagatttcaggggatttttcaaatgtgcaagatgct
ttgtacaatattactggtaggttacgagataaccttttctccagcacagtaagtaatcct
ggaagaaggagcaattcatccatgttaaccgatacaagtccttatggaagactcaaggat
ccgaatcctattggatatcagccatcatcatcggttggtattacttgtggtctgagccgt
cattcaacactaattcaaaatatggatcatcttggtctttcccatagtttagatcatcct
tccccaccaagaccatgggcatcacagatgtcagctttcacagatgttggaaggggtctg
acttctttaaaaagtggcacagatattggcagcagcgggagcaaatctgctattgtgaca
aatacaactgtagagatcatagttcctgaaaatgttattggctctgtgtatggagagaat
ggtgccaatttggctcgtctgagacagatttctagtgccaaggtcatagtgcatgagccc
cgtcctggaacaactgacaggattattgtcatatctgggacacctgatgaaacccaggca
gcacagagccttctacatgcattcattcttactggaccatcatga
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