Malus sylvestris (European crab apple): 126586755
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Entry
126586755 CDS
T09027
Name
(RefSeq) diaminopimelate decarboxylase 1, chloroplastic-like
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00300
Lysine biosynthesis
msyl00470
D-Amino acid metabolism
msyl01100
Metabolic pathways
msyl01110
Biosynthesis of secondary metabolites
msyl01230
Biosynthesis of amino acids
Module
msyl_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
126586755
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
126586755
Enzymes [BR:
msyl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
126586755
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
126586755
NCBI-ProteinID:
XP_050107653
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All DBs
Position
10:9218686..9223204
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AA seq
488 aa
AA seq
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MAAAAQLPFQTSSSLSLKPLKNPITRNPFSQNSILPLRLSTSLKPLVLRAAVVSQNPSKS
LSQTTPFEHCFSKSSDGFLYCEGLKVQDVLDSVERRPFYLYSKPQITRNVEAYKEALEGL
SSVIGYAIKANNNLKILEHLRQLGCGAVLVSGNELRLALQAGFDPTKCIFNGNGKLLEDL
VLAAQEGVFINIDSEFDLENIVAAARIAGKKVNVLLRINPDVDPQVHAYVATGNKNSKFG
IRNEKLQWFLDAVKAHPDELKLVGAHCHLGSTITKVDIFRDAAVLMVKYIDEIRSQGFQV
DYLNIGGGLGIDYYHSGAVLPKPRDLINTVRDVVLSQGLNLIIEPGRSLIANSCCLVNRV
TGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVAPTAPDAEISTFDVVGPVCESADF
LGKDRELPTPPKGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVQEDGSVAKIRHAETFED
HMRFFEGL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgctgcacagctccctttccagacctcatcatccctctcccttaaacccctg
aagaaccctataacccgaaacccattttcccaaaactccattctgcccctccgactctcc
acctccctaaaaccccttgtcctccgagccgccgtcgtctcccaaaacccctccaaatcc
ctgtcccaaacgaccccgttcgagcattgcttctccaaatcctccgatgggtttctctac
tgcgagggcctcaaggtccaggacgtcttagattcggtcgagcggcgccctttctacctc
tacagcaagccacagatcacccgaaacgtcgaggcctacaaggaggcgttggaggggttg
agctctgtcatcggatacgccattaaagccaacaacaatctcaagattttggaacatttg
aggcaattgggttgcggtgctgttcttgtcagtgggaatgagctccggttggctcttcaa
gctgggttcgaccccaccaagtgcatttttaatgggaatggaaaattgttggaggacttg
gttttggctgcccaagaaggtgtttttatcaatattgatagtgaattcgacttggaaaac
attgttgccgcagcgagaattgctggcaagaaggtcaatgttctacttcggatcaacccg
gatgtagatcctcaggttcatgcttatgttgccactggaaacaagaattcgaaatttggt
attagaaatgagaagctgcaatggtttttggatgctgtgaaggcgcatcctgatgagcta
aaacttgttggagcccattgtcatctcggatcaaccattaccaaggtggatatatttcgg
gatgctgctgttcttatggttaagtacattgacgaaatccgttctcaaggttttcaagtt
gattacttgaacattggtggtggacttgggatagattactatcattctggtgccgtactt
ccgaaacccagagatctcatcaacactgttcgtgatgtggtcctatcacaaggtttgaat
cttatcattgaacctggtagatcacttattgcaaattcttgctgcttggtcaaccgagta
acaggtgtcaaaacaaatggcaccaaaaactttattgtgatcgatggaagcatggctgaa
cttatccgtcccagtctctacgatgcttaccaacatatagaactagttgctcctacagca
cctgatgctgagatttcgacttttgatgtggtgggccctgtctgcgagtctgcagatttc
ttagggaaggacagagaacttccgactccacctaagggagctggtctggtggttcacgat
gcaggcgcttattgcatgagcatggcttcaacttacaatcttaaaatgcgccctccagag
tattgggtccaagaagatggatccgtagccaagatccgtcatgcagagacatttgaagac
cacatgcgattctttgagggtctttga
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