Malus sylvestris (European crab apple): 126586760
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Entry
126586760 CDS
T09027
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126586760
Membrane trafficking [BR:
msyl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
126586760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
FimL_2nd
Motif
Other DBs
NCBI-GeneID:
126586760
NCBI-ProteinID:
XP_050107662
LinkDB
All DBs
Position
2:complement(21419590..21428687)
Genome browser
AA seq
1568 aa
AA seq
DB search
MASSPFEVEDTDEDFFDRLVNDDIDFIEFVHKPVQKKEFVDVKAFSKLSISEVDPVGVDT
SGNASLGVNGELGHEDGVVVEQSDPVRDPVVVKESESLIVDSRNKASASDDIVDNRNGAS
APDDIDDNRNEPTELEDKAGNGNEANSLEDKAGNENEANELEDKGEEGSVNGMVNTSLAS
VGSGVKVAQWSSFSGEFGDVSVDPFAILGNTDKLWAESNVTDIASENSVPDLGVSSYGQH
QEGQHYGVVEGQILDGQDLNTSLASVGSRLKEVQWTSFNSDWNPSGDFGDFSADPFANLG
NTDESWAMSNVTDGALENSVADVGISSYGQQQEGQHYGAVEEQNTDGQELNSSQNWDNLY
PGWRYDPNTGQWYQLEGYDVNANASTDLNTNENAQESVNVHSQTADNVVFSDQKADAYYL
QQPAQSVPQSVAQGSETSAVTDWNQHSNGSTDYPAHMVFDPQYPGWYYDTITQEWKQLES
STPAFDQSTTVEYNQQFHNSNVENHGSDVANWDGSMSTYNQQNASMWHNQTVSASDTISV
TETQQYTTQYFSTGHLTSSVNQQPGFNPSGSVALSQQASHGYNFSSGVGGFEGFNPSGNL
SHHQHQAKEPNQVTYFSPANFDSQKPVQFLQQPLHSGTQFSHEARAGRSSAGRPPHALVT
FGFGGKLIVMKDYSNMYGSQDSVGGLINVLNLMDVVMDKTDVASFGNDGRAYFHALCQQS
YPGPLVGGSVGSREVNKWIDEKIANCETPYMDIRKGDHSRLLFSLLKIACQYYGKLRSPF
GTDVALKESDSPESAVAKLFASAKRSNEYSALMSQNLPSEAQSQATALEVQKLLVSGRKK
EALQCAQNGQLWGPALVIASQLGEQFYGDTVKLMALNQLAAGSPLRTLCLLIARQPADVF
SSATTDSSIPNSMNVSQQQTQVGANSMLDEWEENLAILTANRTKDDELVIIHLGDCLWKE
RGHVYVNTPAHICYLVAEANFEAYSDSARLCLIGADHLKYPRTYASPEAIQRTELYEHSR
VLGNSQFLLLPFQPYKLIYAHMLAEVGKVADALKYCQAILKSLKYGRAPEVDTWRQLVSS
LEERIRAHQQGGYSTNSAPTKLMGKLLTLFDNTAHRVVGGPPPPAPSISQVLAQRNEHAQ
QPGGLSVSSNQSTMAMPSFMPGPSLPNSQSTMAVSSFMPGPSVPYSQSTMAVSSFIPGPS
VSNSQSTMTMSPLMPSASMEPISEWTAEGNQLNIPNRSISEPNFGGCPNKVDSSKKVESS
KPRENESTSSGSSRFGFGIFQKTLGFVKRSRQAKLGEKNKFYYDEKLKRWVEEGVEPPAG
EAALPPPPPTAAFPNRMQDYNINDALETKSFPAVNGPQIPSLVSPEPSSGIPPIPPSSNQ
FSAHGRTGVRSRYVDTFNKGGRVPTNLFRSPSLPSAKPGGGPKPNIFFPAPVTSYEETVQ
TPGESIQEPLVTNINPPKSFEGEFSTPQTSTSSSMTMQRFPSMDNIVQKRAGDMGNGNSF
APPESRRAASWSGSLNHASNPSMRSEIKPLGRPLGMSPLSQMHNSPPSSMQLPSSGGSLG
DDLQEVEL
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttctccgtttgaggtggaggatacagatgaggatttctttgacagattggtt
aatgatgacattgactttattgaatttgtgcataaaccggtacagaagaaagagtttgtc
gatgtcaaagctttttcgaaattgagtatttcggaagtagatccggtgggagtagacacc
agcggcaatgctagtcttggggttaatggtgaattgggtcatgaagatggggttgtagtg
gaacagtctgatcccgtacgggaccctgtagttgttaaagagagtgagtcactgatagtg
gattctagaaataaggctagtgcatcagatgatatagttgataatagaaatggggctagt
gctccagatgatatagacgataatagaaatgagccaactgagttagaggataaagcaggt
aatggaaatgaggctaattcattggaggataaagcaggtaatgaaaatgaggctaatgaa
ttggaggataaaggggaggaaggttcagtaaatgggatggtgaatacgagtttggcatca
gtgggatctggtgtgaaagtagctcagtggagctcgttttctggtgaatttggagatgtc
tcagtggacccatttgcaattttgggcaatacagacaaattgtgggctgagtctaatgtc
actgatattgcttcggagaactcagttcctgatttaggtgtttctagttatggccagcac
caagaaggtcagcactatggggttgttgagggacaaattttagatgggcaggacttgaat
acgagtttggcatcagttggatcacgtttgaaagaagttcaatggacttcgtttaactca
gattggaatccttctggtgactttggagatttctccgcagacccatttgcaaatttgggt
aatacagacgaatcctgggccatgtctaatgtcactgatggtgccttggagaactcagtt
gctgatgtaggcatttctagttatgggcagcaacaagaaggtcagcactatggggctgtt
gaggaacaaaatacagatggccaggagttgaatagtagtcagaattgggataacctttat
ccgggatggaggtacgatccaaatactgggcaatggtatcagttggagggctatgatgtg
aatgcaaatgcaagtacagatttgaacactaatgaaaatgctcaggagagtgttaatgtg
cattctcaaactgcagataatgtggttttttcagaccagaaagcagatgcttattattta
cagcaaccagcacaatctgttcctcaaagtgtggcccagggatctgaaactagtgctgtt
actgactggaatcagcattctaatgggagcacggactaccctgcccatatggtttttgat
ccccaataccctgggtggtactatgacacaattacccaagaatggaagcagttggagtct
tccactccagcttttgaccagtcaacaactgtggagtataatcagcaatttcacaattca
aatgtggagaatcatggttcagatgttgcaaattgggatggatctatgagcacctacaat
cagcaaaatgcgagtatgtggcataatcaaacagtttctgcaagtgacactattagtgtt
actgagacacagcagtatacgacccagtatttttcaaccgggcatctaaccagttctgtg
aatcaacaaccagggttcaatccttctggatcagttgctcttagtcaacaggcaagtcat
ggctacaactttagtagcggggttggagggtttgaaggctttaatccttctggaaactta
tctcatcatcagcatcaggctaaggagccaaaccaagtgacatacttctcacctgctaac
tttgatagtcagaagccagtacaatttttacagcaaccactccacagtggaactcagttt
tctcatgaggccagagcagggaggtcatctgcaggacgtcctccacatgctctagttacc
tttggatttggtgggaaacttatagtcatgaaagattacagcaatatgtatggaagccag
gactctgtaggaggtttgattaatgttctcaatctgatggacgttgtcatggacaaaact
gatgttgcaagctttggaaatgatggtcgtgcttatttccatgctttgtgccagcaatct
taccctggccctttggttggggggagtgttggaagtagggaagttaacaaatggattgat
gaaaagattgcaaactgtgaaactccttatatggacatcagaaaaggggaccattcgagg
ttgcttttctctttactaaaaatagcatgccagtattatggaaaacttcgatctcccttt
ggcactgatgtagcattgaaggaatctgatagtccggagtcagccgttgccaagcttttt
gcctctgctaagagaagcaacgagtacagtgctcttatgtcacagaacttgccttctgaa
gcacagagtcaagctactgctcttgaggtacaaaagcttcttgtctctggtaggaagaaa
gaggctttacaatgtgcacagaatggtcagttgtggggtccagcactcgtgattgcatca
cagcttggtgaacagttttatggtgatactgtaaagcttatggcactaaaccagttagca
gcaggatcaccattgcggactttgtgcttattaattgccaggcagcctgcagatgtgttt
tcaagtgccactacagatagcagtatacctaattctatgaatgtatcacaacagcagaca
caggttggggccaattccatgttagatgaatgggaagagaatttagccatcttaactgcg
aaccgaacaaaagatgatgagcttgttatcatccatcttggagattgcctatggaaggaa
aggggacatgtatatgttaacactcctgcacacatatgttatctggttgcagaagccaat
tttgaggcatattcagacagtgcaagactctgtcttattggtgcagatcacttgaaatat
ccacgaacatacgccagtcctgaggctatccagaggacagaattatacgaacactcaagg
gttctcggaaattctcagtttctcctactaccttttcagccctataagcttatttatgcc
cacatgctggcagaagttggcaaagttgcagatgccttgaaatactgtcaagcaatttta
aagtctttgaaatatggtcgagcacctgaagtggacacatggagacagttagtgtcatct
ctggaggagcggataagagcccatcagcagggtggttacagtacgaattcagctccaacc
aaactgatgggtaaattgcttacattatttgataataccgctcatcgtgttgttggaggc
ccgcccccacctgcaccttcaatatcacaagtccttgcccaacgtaatgagcatgctcag
caaccaggaggcctaagtgtatccagtaatcaatcaactatggctatgccttcgtttatg
ccaggcccaagtttacccaatagtcagtcaacaatggctgtgtcttcgtttatgccaggc
ccaagtgtgccctatagtcaatcaacaatggccgtgtcttcgtttataccagggccaagc
gtatccaatagtcagtcaacaatgactatgtctccgttgatgccttcagcatcgatggag
ccaataagcgaatggactgctgagggcaatcaactgaatatacccaatagaagcatatcg
gaaccaaactttggggggtgcccaaataaggttgattcgtccaagaaagtggaatcttct
aaaccacgagaaaatgaatcaacatctagcgggtcatctcgttttggttttggcatattt
caaaagactctgggatttgtgaaaagatcccggcaggctaaattgggtgaaaagaataaa
ttttactatgatgagaaacttaagcgatgggttgaagaaggtgttgaacctcctgccgga
gaagcagccttaccacctccaccaccaactgcagccttcccgaatagaatgcaagattac
aatataaatgatgcactggaaaccaaaagtttccctgcagttaatgggccacaaatccca
agcctggtgtcccctgaaccgagttctggaataccacccattccaccgagttccaaccag
ttctccgcacatggacgtacgggtgttcgctcaaggtatgttgatacattcaacaaaggc
ggcagggtgccaacaaacttatttcggtcaccatctcttccatctgctaaacctgggggt
ggtcccaaacccaacatttttttcccggctccagtaacttcctatgaggagacggttcaa
acacctggagaaagcatacaagagccattggtgaccaacatcaatcccccaaaatcattt
gagggtgaattctctactccacaaacatcaacttcgtcttcaatgactatgcagcggttt
cctagcatggataacattgtacaaaagagagcaggagacatgggaaatggcaatagcttt
gcaccccctgaatcccgccgtgcagcatcgtggagtggaagccttaatcatgctagcaat
ccatctatgaggagtgaaatcaaacctctaggaagaccgcttggtatgtctccattgtca
caaatgcacaatagtccgccatcatcgatgcagcttccaagtagtggcggcagtttagga
gacgaccttcaagaagttgaactctga
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integrated database retrieval system
