KEGG   Malus sylvestris (European crab apple): 126587036
Entry
126587036         CDS       T09027                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 1
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    126587036
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:msyl04131]
    126587036
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msyl04147]
    126587036
Membrane trafficking [BR:msyl04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    126587036
Exosome [BR:msyl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   126587036
  Exosomal proteins of other body fluids (saliva and urine)
   126587036
  Exosomal proteins of colorectal cancer cells
   126587036
  Exosomal proteins of bladder cancer cells
   126587036
SSDB
Motif
Pfam: VPS28 GDH_C DAHL DUF7784 ARM_KNTC1_3rd
Other DBs
NCBI-GeneID: 126587036
NCBI-ProteinID: XP_050107971
LinkDB
Position
10:40125516..40127507
AA seq 209 aa
MEVKLANDKREREMYDSFAELYAIIKTTEKLEKAYVRDVITSSAYETECQKLIAHFKTLA
STLKDTIPSIERFADTYKMDCPAAINRLVTSGVPATVEHRAAAASSMTSSAAAVAECTQN
FITAMDSLKLNMVAVDQVHPLLSDLSTSLGKLTFLPPDFLGKVKLKEWIARLSKMGAADE
LTEQQSRQLHFDLESSYNSFMAALPNYGT
NT seq 630 nt   +upstreamnt  +downstreamnt
atggaggtcaagttggccaatgacaagcgtgaaagagaaatgtatgatagttttgccgaa
ctatacgccattatcaagaccactgagaagcttgaaaaggcgtatgttcgggatgtgatc
acttcttctgcgtatgagactgaatgccaaaaactcattgcccactttaagacattggca
tccacgcttaaggacaccatcccgagcatcgagcggtttgcagatacatacaagatggac
tgcccagcagctataaaccgccttgtgacctcaggggtgcctgccacagtggagcaccgg
gctgctgcagcttcctccatgacttcctcagctgctgctgtggcagagtgcacacagaat
ttcatcaccgcaatggactccttgaagctgaacatggtggcagttgatcaggtgcacccg
ctgctctcagacctctcaacgtcccttgggaagttaacctttctgccaccggactttttg
ggaaaggtgaagttgaaggaatggattgcaaggctgtcgaagatgggagcagctgatgag
ttgacggagcagcagtcaaggcagcttcactttgatctcgagtcctcttacaactcgttt
atggcagctttgccgaattatggtacttga

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