Malus sylvestris (European crab apple): 126587414
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Entry
126587414 CDS
T09027
Name
(RefSeq) light-mediated development protein DET1 isoform X1
KO
K10571
de-etiolated-1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126587414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126587414
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
126587414
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
126587414
NCBI-ProteinID:
XP_050108432
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Position
2:32830244..32839474
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AA seq
533 aa
AA seq
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MELQHHQSPMDVFRPKKRSNVVCRIFDRQISSGASGTSVRYTRRFYENVVPDYTIYEVEC
PDQIYRKFTDDGQYLICFSRNHQDLIVYRPTWLSYSCKEDCNTNDLPPKAKKFESFFSQL
YCVSLASSNDLICKDFFLYTGSNQFGIFATSTAQIHDALPVGGAVQGVPSIEKITFHLLR
LEDGVVLDQKSFQNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQIRDSGNLVDVRSIG
TFCREDDVLFLTSNTQTDLHQGQPSSDYCFLSGIKQRLLSFIFRGIWNEESDQSSRVQLL
KKKFYFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGVVSRNVDHHRSFFAVYNMETTEIV
AFYQNSADELYLLFEQFGDHFHATSRNSLYLNFTSSHSNNMHAREQLRSNKNKASSSSAS
SQFVKKVLASLPFSCQSESPSPYFDQSLFKFDEKSISPMDRHRPAPDQHIKFCLRRKPKV
LKFKMKPGPEAGSADNRTKRISSFLFHPFLPLALSIQQSMSLQPSVLNIHFRK
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcagcatcatcagtcaccaatggacgtgttcagaccaaaaaaaagaagcaat
gttgtttgcaggattttcgaccgccaaatttcgtctggtgcttctggaaccagtgttcgc
tatactaggcgattttacgagaatgtggtccctgattataccatatatgaagttgagtgc
ccagatcagatttaccgtaaattcactgatgatggacaatacctaatatgtttcagcaga
aatcatcaagatctgattgtttatagaccaacatggctttcatattcatgcaaagaagat
tgcaatactaatgatcttcccccaaaagcaaaaaagtttgagagcttctttagccagtta
tactgtgtatcacttgcttctagcaacgatcttatatgcaaagacttttttctttacacg
gggagtaaccaatttggaatatttgctacttctactgcacaaattcatgatgcactccct
gttggaggagctgttcagggagtcccatcgatagaaaagataacatttcacctcttgaga
ttggaggatggagttgttctggatcagaagtcctttcagaatgattttattaatctggcc
cataatatgggtgtcttcttgtatgacgatttactggcgattgtgtctcttcgctatcag
acaatacacattctgcaaatcagggattctggcaaccttgttgatgtacgatcaattggt
acattttgtcgtgaagatgatgtgctttttctcacttcaaatactcagactgatttacat
cagggccagccttcttcagattattgttttcttagcggaatcaaacaacggttgctatct
ttcatatttagaggaatatggaatgaagaatcagatcagtcatcgagggtccaattgctg
aagaagaagttctatttccattttcaagactatgttgacttgattatctggaaggtacag
ttcttggaccggcaccacctgctaataaagtttggtagtgtagatggagtggtatctcgc
aatgtagatcatcatcgatccttttttgcagtatataacatggagacaactgaaattgta
gctttttatcagaattcggcagatgagctttatctcttgtttgagcaattcggcgaccac
ttccatgcaacctcgagaaattcattgtatttaaatttcacatcatctcactcaaataac
atgcatgctcgagaacaactcagaagtaataaaaataaagcaagtagctcttcagcctct
tcacagtttgtgaagaaggtgctagcctctttgccttttagttgtcagtcggagagccct
tctccctactttgaccaatcactttttaagtttgatgaaaagtcgatttctccaatggat
cggcatagacccgcaccagatcaacacataaagttctgcttaagaaggaaaccaaaagtt
ctcaaatttaagatgaaaccaggtccagaagctggtagcgcggacaatcggactaaaagg
atctcttcgtttctttttcatccatttttgcctcttgccctgtccatccagcagagtatg
tccttgcagccatcagttttgaatattcacttccggaaataa
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