KEGG   Malus sylvestris (European crab apple): 126587560
Entry
126587560         CDS       T09027                                 
Name
(RefSeq) protein HIRA-like isoform X1
  KO
K11293  protein HIRA/HIR1
Organism
msyl  Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:msyl03036]
    126587560
Chromosome and associated proteins [BR:msyl03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     126587560
SSDB
Motif
Pfam: Beta-prop_CAF1B_HIR1 Hira WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd ANAPC4_WD40 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_SCAP FadA R3H-assoc DUF1907
Other DBs
NCBI-GeneID: 126587560
NCBI-ProteinID: XP_050108597
LinkDB
Position
10:5455509..5464094
AA seq 1032 aa
MISEKPSWIRHEGMQIFSIDVQPGGLRLATGGGDHKVRVWNMKSLGRDLDNEESAQRLLA
TLRDHFGSVNCVRWAKHGRFLASGSDDQVILIHERKPGSGTTEFGSGEPPDLENWKVSMT
LRGHSADVVDLNWSPDDLMLASGSLDNTIHIWNMSNGICTAVLRGHSSLVKGVTWDPIGS
FIASQSDDKTVIIWRTSDWSLAHRTDGHWQKSLGSTFFRRLGWSPCGHFITTTHGFQKPR
HSAPVLERGEWSATFDFLGHNAPVIVVKFNHSMYRRNISNAQEKAAPIGWTNGASKTGGK
EKEPQPYNVIAIGSQDKTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDG
SVATFHFDVKELGNRLSDAELDELKRNRYGDVRGRQANLAESPAQLLFEAASAKQASSKK
MVLEVQQNETVGKPSTEATVATITSADSLNKVSIPARISSPVKQREYRRPDGRKRIIPEA
VGVPLQQENISAGVQTQALDFPSECSDKNNDENGLIAADSGIKESSVRGVIGRSTEIKEG
HGVTARAMITKSLVIEKVPASTGGDESIAVEQSGNLKASSSAGSSCSTLSIRVFDRKEGE
DNVPICLEARPREHAANDIVGLGNTFIMKETEITCARGLQTLWSDRISGKVTVLAGNANF
WAVGCEDGCIQVYTTCGRRAMPTMMVGSAAIFIDCDERWKLFLVTRKGSFYVWDLFKQNC
LHHDSLASLVASNPNPSAKDAGVIKVISAKLSRSGSPLVVLATRHAFLFDMGLMCWLRVA
DDCFPGSNFASSWHSGSTPGGELAALQIDVRKYVARKPGWSRVTDDGVQTRAHLEAQLAS
SLALKSAKDYCQCLLSYIRFLAREADESRLREVCESFLGPPTGMVDDTTLDLNNSAWDPC
VLGMRKHKLLREDILPAMASNRKVQRLLNEFMDLISEYESAETNIEKKIQTSQTAHPPAA
DEMDSAPSRTNEMDIVPAATEKKKSVPASTDQKESSQLATDTENSAPVAEDKVNSDPPMI
SQVSVAAQDAGS
NT seq 3099 nt   +upstreamnt  +downstreamnt
atgatttcagagaagcccagttggattagacatgagggaatgcaaattttctccattgac
gttcaacctggtggacttaggcttgccactggtgggggtgatcacaaggtgcgggtatgg
aatatgaaatcccttggcagggatttggataatgaagaatcagcccagaggctacttgca
actctccgtgatcactttggttctgtgaattgtgttaggtgggctaaacatggtcggttt
cttgcatcaggatctgatgaccaagtgattctaattcatgagagaaagcctggttcagga
accactgagtttggcagtggagagccacctgaccttgaaaattggaaagtttcaatgact
ttgagagggcatagtgcagatgtggtggatcttaattggtctccagatgacttgatgttg
gccagtggaagtttagataacactatacacatctggaacatgagcaatggtatttgcact
gctgttctgaggggtcactctagcctggttaaaggagttacttgggatccaattggctcc
ttcatagcaagtcaatcagatgataagactgtaattatttggcgaacaagtgactggagc
cttgctcacaggacagacggccattggcaaaaatcacttggatccacctttttcaggcgg
ctgggatggtccccttgtggccacttcattactaccactcacggattccagaaaccaagg
cattctgcacctgttctagagagaggggaatggtctgctacatttgacttcttaggacat
aatgcccctgtgatcgtagtgaagtttaaccattcaatgtataggaggaatatttccaat
gctcaggaaaaagctgcacccatcgggtggactaatggggcttcaaagacaggaggaaaa
gagaaagaaccacaaccttataatgtcattgctattgggagtcaggacaagactataaca
gtatggactactgcaagtccccgacctctctttgtagcaaagcatttctttactcaaagt
gttgtggatttatcctggagccctgatggctattcactttttgcatgttctttggatggt
tcggtggcaactttccattttgatgttaaagaacttggcaaccgtttaagtgatgctgaa
ctggatgaattgaagagaaaccgttatggagatgttagaggtcgccaagcaaatttagca
gaaagcccagctcagttattgtttgaagcagcatctgctaagcaagcctcaagcaaaaaa
atggttctggaagttcagcaaaacgagacagttggaaaaccttctactgaagcaacggtt
gcaacaataacttctgcagacagcttaaataaggtttcaatacctgccagaatttcaagt
cctgtgaagcagagggaatatagacgccctgatggtagaaagaggattattccagaagca
gttggggtgcctctgcagcaggaaaatatatctgctggggttcaaacccaggcacttgac
ttcccttctgaatgttctgataaaaacaatgatgagaatgggttaattgctgctgatagt
ggcatcaaagaaagttctgttaggggagtaattggcagaagcactgaaataaaggaagga
catggggttactgctagagctatgattaccaagagccttgttattgagaaggttcctgct
tccacaggtggagatgaaagcatagctgtggaacagtcaggtaatttgaaggcgtctagt
tcagcaggttcttcatgttccactctttcaattagggtgtttgataggaaagaaggggaa
gacaatgtaccaatatgcttggaagctcgacctagggaacatgctgcaaacgacatcgtt
ggcttgggaaatacatttatcatgaaagaaacagaaattacttgcgcaagagggttacag
actctttggtcagataggatatctgggaaagtcactgttttagctggaaatgcaaacttc
tgggctgttgggtgtgaagatggatgcatacaggtttacacaacttgcgggagacgtgct
atgccaactatgatggtaggatctgcagcaatatttatagattgtgatgagcgctggaaa
ttatttttggtcacaagaaaaggatccttttatgtatgggatctattcaagcagaattgt
ctccaccatgactcattggcatctctggtcgcttcaaacccaaacccatctgcaaaagat
gcaggcgtgatcaaagttatatcagcaaagctatcaagatctggttctcctcttgttgtt
cttgccactcgccatgccttcctctttgatatgggcctgatgtgttggcttagggttgca
gatgactgctttcctgggtcaaattttgcaagctcctggcattcaggttcaactccgggt
ggtgagctggctgctttgcagattgatgttaggaagtatgtggccagaaagccaggttgg
agcagggtgacagacgatggggtgcagacacgtgctcacttggaggctcagttggcttcc
tcgctagctttaaagtcagccaaagactattgccaatgccttctatcatatattcgcttc
cttgcaagagaagcagatgagtctcgtttacgagaagtgtgtgagagtttccttggacct
ccaactgggatggtggacgatacaactttagatttaaacaactcggcatgggatccttgt
gtgcttggaatgaggaaacataaacttttacgagaagatatccttccggcaatggcttca
aatagaaaagtacagagattgcttaatgaattcatggatctcatttccgaatatgaaagc
gctgaaacaaatatagagaaaaagattcaaacttcgcagacagcacatccaccagcagct
gatgaaatggactctgctccttccaggacaaacgaaatggacattgtccctgcagcaaca
gagaaaaagaagtctgttcctgcttcaactgaccaaaaggagtcttcccagttagcaaca
gatacagaaaattctgctccagtagccgaagacaaagttaattcagatccgccaatgatc
agtcaagttagtgttgctgcacaagatgcaggttcttga

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