Malus sylvestris (European crab apple): 126587560
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Entry
126587560 CDS
T09027
Name
(RefSeq) protein HIRA-like isoform X1
KO
K11293
protein HIRA/HIR1
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msyl03036
]
126587560
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
126587560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_SCAP
FadA
R3H-assoc
DUF1907
Motif
Other DBs
NCBI-GeneID:
126587560
NCBI-ProteinID:
XP_050108597
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All DBs
Position
10:5455509..5464094
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AA seq
1032 aa
AA seq
DB search
MISEKPSWIRHEGMQIFSIDVQPGGLRLATGGGDHKVRVWNMKSLGRDLDNEESAQRLLA
TLRDHFGSVNCVRWAKHGRFLASGSDDQVILIHERKPGSGTTEFGSGEPPDLENWKVSMT
LRGHSADVVDLNWSPDDLMLASGSLDNTIHIWNMSNGICTAVLRGHSSLVKGVTWDPIGS
FIASQSDDKTVIIWRTSDWSLAHRTDGHWQKSLGSTFFRRLGWSPCGHFITTTHGFQKPR
HSAPVLERGEWSATFDFLGHNAPVIVVKFNHSMYRRNISNAQEKAAPIGWTNGASKTGGK
EKEPQPYNVIAIGSQDKTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDG
SVATFHFDVKELGNRLSDAELDELKRNRYGDVRGRQANLAESPAQLLFEAASAKQASSKK
MVLEVQQNETVGKPSTEATVATITSADSLNKVSIPARISSPVKQREYRRPDGRKRIIPEA
VGVPLQQENISAGVQTQALDFPSECSDKNNDENGLIAADSGIKESSVRGVIGRSTEIKEG
HGVTARAMITKSLVIEKVPASTGGDESIAVEQSGNLKASSSAGSSCSTLSIRVFDRKEGE
DNVPICLEARPREHAANDIVGLGNTFIMKETEITCARGLQTLWSDRISGKVTVLAGNANF
WAVGCEDGCIQVYTTCGRRAMPTMMVGSAAIFIDCDERWKLFLVTRKGSFYVWDLFKQNC
LHHDSLASLVASNPNPSAKDAGVIKVISAKLSRSGSPLVVLATRHAFLFDMGLMCWLRVA
DDCFPGSNFASSWHSGSTPGGELAALQIDVRKYVARKPGWSRVTDDGVQTRAHLEAQLAS
SLALKSAKDYCQCLLSYIRFLAREADESRLREVCESFLGPPTGMVDDTTLDLNNSAWDPC
VLGMRKHKLLREDILPAMASNRKVQRLLNEFMDLISEYESAETNIEKKIQTSQTAHPPAA
DEMDSAPSRTNEMDIVPAATEKKKSVPASTDQKESSQLATDTENSAPVAEDKVNSDPPMI
SQVSVAAQDAGS
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagagaagcccagttggattagacatgagggaatgcaaattttctccattgac
gttcaacctggtggacttaggcttgccactggtgggggtgatcacaaggtgcgggtatgg
aatatgaaatcccttggcagggatttggataatgaagaatcagcccagaggctacttgca
actctccgtgatcactttggttctgtgaattgtgttaggtgggctaaacatggtcggttt
cttgcatcaggatctgatgaccaagtgattctaattcatgagagaaagcctggttcagga
accactgagtttggcagtggagagccacctgaccttgaaaattggaaagtttcaatgact
ttgagagggcatagtgcagatgtggtggatcttaattggtctccagatgacttgatgttg
gccagtggaagtttagataacactatacacatctggaacatgagcaatggtatttgcact
gctgttctgaggggtcactctagcctggttaaaggagttacttgggatccaattggctcc
ttcatagcaagtcaatcagatgataagactgtaattatttggcgaacaagtgactggagc
cttgctcacaggacagacggccattggcaaaaatcacttggatccacctttttcaggcgg
ctgggatggtccccttgtggccacttcattactaccactcacggattccagaaaccaagg
cattctgcacctgttctagagagaggggaatggtctgctacatttgacttcttaggacat
aatgcccctgtgatcgtagtgaagtttaaccattcaatgtataggaggaatatttccaat
gctcaggaaaaagctgcacccatcgggtggactaatggggcttcaaagacaggaggaaaa
gagaaagaaccacaaccttataatgtcattgctattgggagtcaggacaagactataaca
gtatggactactgcaagtccccgacctctctttgtagcaaagcatttctttactcaaagt
gttgtggatttatcctggagccctgatggctattcactttttgcatgttctttggatggt
tcggtggcaactttccattttgatgttaaagaacttggcaaccgtttaagtgatgctgaa
ctggatgaattgaagagaaaccgttatggagatgttagaggtcgccaagcaaatttagca
gaaagcccagctcagttattgtttgaagcagcatctgctaagcaagcctcaagcaaaaaa
atggttctggaagttcagcaaaacgagacagttggaaaaccttctactgaagcaacggtt
gcaacaataacttctgcagacagcttaaataaggtttcaatacctgccagaatttcaagt
cctgtgaagcagagggaatatagacgccctgatggtagaaagaggattattccagaagca
gttggggtgcctctgcagcaggaaaatatatctgctggggttcaaacccaggcacttgac
ttcccttctgaatgttctgataaaaacaatgatgagaatgggttaattgctgctgatagt
ggcatcaaagaaagttctgttaggggagtaattggcagaagcactgaaataaaggaagga
catggggttactgctagagctatgattaccaagagccttgttattgagaaggttcctgct
tccacaggtggagatgaaagcatagctgtggaacagtcaggtaatttgaaggcgtctagt
tcagcaggttcttcatgttccactctttcaattagggtgtttgataggaaagaaggggaa
gacaatgtaccaatatgcttggaagctcgacctagggaacatgctgcaaacgacatcgtt
ggcttgggaaatacatttatcatgaaagaaacagaaattacttgcgcaagagggttacag
actctttggtcagataggatatctgggaaagtcactgttttagctggaaatgcaaacttc
tgggctgttgggtgtgaagatggatgcatacaggtttacacaacttgcgggagacgtgct
atgccaactatgatggtaggatctgcagcaatatttatagattgtgatgagcgctggaaa
ttatttttggtcacaagaaaaggatccttttatgtatgggatctattcaagcagaattgt
ctccaccatgactcattggcatctctggtcgcttcaaacccaaacccatctgcaaaagat
gcaggcgtgatcaaagttatatcagcaaagctatcaagatctggttctcctcttgttgtt
cttgccactcgccatgccttcctctttgatatgggcctgatgtgttggcttagggttgca
gatgactgctttcctgggtcaaattttgcaagctcctggcattcaggttcaactccgggt
ggtgagctggctgctttgcagattgatgttaggaagtatgtggccagaaagccaggttgg
agcagggtgacagacgatggggtgcagacacgtgctcacttggaggctcagttggcttcc
tcgctagctttaaagtcagccaaagactattgccaatgccttctatcatatattcgcttc
cttgcaagagaagcagatgagtctcgtttacgagaagtgtgtgagagtttccttggacct
ccaactgggatggtggacgatacaactttagatttaaacaactcggcatgggatccttgt
gtgcttggaatgaggaaacataaacttttacgagaagatatccttccggcaatggcttca
aatagaaaagtacagagattgcttaatgaattcatggatctcatttccgaatatgaaagc
gctgaaacaaatatagagaaaaagattcaaacttcgcagacagcacatccaccagcagct
gatgaaatggactctgctccttccaggacaaacgaaatggacattgtccctgcagcaaca
gagaaaaagaagtctgttcctgcttcaactgaccaaaaggagtcttcccagttagcaaca
gatacagaaaattctgctccagtagccgaagacaaagttaattcagatccgccaatgatc
agtcaagttagtgttgctgcacaagatgcaggttcttga
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integrated database retrieval system