Malus sylvestris (European crab apple): 126587760
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Entry
126587760 CDS
T09027
Name
(RefSeq) probable CoA ligase CCL6
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00061
Fatty acid biosynthesis
msyl00071
Fatty acid degradation
msyl01100
Metabolic pathways
msyl01212
Fatty acid metabolism
msyl04146
Peroxisome
Module
msyl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
126587760
00071 Fatty acid degradation
126587760
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
126587760
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
msyl01004
]
126587760
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126587760
Enzymes [BR:
msyl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
126587760
Lipid biosynthesis proteins [BR:
msyl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
126587760
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of breast milk
126587760
Exosomal proteins of breast cancer cells
126587760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
126587760
NCBI-ProteinID:
XP_050108790
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Position
10:11987638..11993362
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AA seq
658 aa
AA seq
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MDFIVKVEEPRPAANGRPSAGPAYRSIYAKDGLMELPEGLESPWQFLSDSAKKYPSNPML
GRRQVTDTKVGPYVWLTYQEVYDAAIRMGSAIRSRGVNPGDRCGIYGSNCPQWLTAMEAC
NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKLPAVLSCLPNCSTNLKTIVSFAN
VSSAQKEEAEGLGVSCFSWEEFSQLGNADCELPPKRRTDICTIMYTSGTTGEPKGVRISN
GAIMSEVLSVEQLLFLTDRVCTEEDSYFSFLPLAHIYDQIMESYCIYKGSSVGFWRGDVR
FLLEDLQELMPTMFCGVPRVYDRIYSGIVNKVSSGGVLKKTLFQYAYNYKLANLEKGLPQ
EKAAPLLDKLVFDKIKQALGGRVRILLSGAAPLPRHVEEFLRVTSCSTLSQGYGLTESCG
GSFTSIGNVFPMIGTVGVPITTIEARLESVPEMGYDALSSVPRGEICLRGTTLFSGYHKR
EDLTEEVLVDGWFHTGDIGEWQTDGAMKIIDRKKNIFKLSQGEYVAVENIESKYLQCPLI
TSIWVYGNSFESFLVAVVVPDPKALEDWAAEHHLTDDFKSLCQNPKASKYILDELNGTGQ
KQQLRGFELLKAVHLEPKPFDMERDLITPTFKLKRPQLLKYYKDRIDTLYSEGKGARV
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggatttcatagtgaaggttgaggaaccgaggccagctgccaacgggaggccgtcagcg
gggccggcgtatcggagcatttacgctaaggatggtctcatggagttgccggaggggttg
gagtctccttggcagtttttgagtgactctgctaagaaatatccgagcaacccaatgctt
gggcggcggcaggtcaccgacacaaaggtgggtccgtatgtgtggcttacgtatcaagag
gtttatgacgctgccattcgaatgggttcagccatcagaagccgcggtgtcaatcctgga
gatcgttgcggtatatatggatcaaactgcccccagtggcttactgcaatggaggcctgt
aatagccaagccataacatacgttccactctatgacaccctcggtgctaatgcggttgag
ttcatcatcaatcatgctgaagtttcaatagcttttgttcaagaaaacaaactccctgct
gttctgtcatgccttccaaattgttctaccaatttaaaaacaattgtcagctttgcaaat
gtttctagcgctcaaaaggaggaagctgaaggactgggggtatcttgtttttcttgggag
gaattctctcagttgggaaatgcagattgtgaactacctccgaaacggaggactgacatt
tgcacaataatgtatacaagcggaacaactggagaaccaaaaggtgtacgtattagtaat
ggagcaattatgtcagaagtattgtctgtggagcaactactatttctaacagatagagtg
tgtacggaagaagattcatatttttcctttcttccattggcccatatatatgatcaaata
atggagagttattgcatctacaaaggatcctctgtaggtttctggcgaggagatgtcaga
tttctactcgaggaccttcaggaactaatgcctactatgttttgtggggtacctagagtg
tatgatcgcatatactctggtattgtcaacaaagtttcatctgggggtgtattgaagaag
acattattccaatatgcttataactacaagttggcgaatctggaaaagggtctcccacaa
gaaaaagcagcacctctcttggataaacttgtctttgataagataaaacaagcgttaggg
ggacgagttcgtatattgttgtctggtgctgcccctttgcctaggcatgtggaggaattt
ttgagggtcaccagctgcagcactttatcacaaggatatggccttactgaaagctgtggt
ggtagcttcacgtccattggcaatgtttttcctatgattggaactgtcggtgtccctatc
acaactattgaagcaaggcttgagtcagtgccggaaatgggatacgatgcactttccagt
gtgccccgtggagagatttgcctgagaggaacaaccttgttttctggttaccataagcga
gaagatctaacagaggaagtccttgttgatgggtggtttcatacaggtgacattggagaa
tggcagacagatggagcaatgaaaatcatagataggaaaaagaatatatttaaactatcg
caaggtgaatatgttgcggtagaaaacattgaaagcaaatacttgcaatgccctcttatc
acatcgatttgggtatatgggaacagctttgagtcgtttcttgttgctgtggtggtccct
gaccctaaggcgttggaggattgggcagcagagcatcacttgaccgatgatttcaaatca
ttatgtcaaaacccgaaggcaagcaagtacattttggatgagctcaatggtactggtcag
aaacagcaactccgaggttttgagctgttaaaagcggttcacttggaaccgaagcccttt
gacatggagagggatctcattactccaacattcaaactgaagagaccacagctgcttaaa
tattacaaggaccgtattgatacactgtacagcgaaggaaaaggagcaagggtatga
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