Malus sylvestris (European crab apple): 126587860
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Entry
126587860 CDS
T09027
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa-like isoform X1
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126587860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126587860
Spliceosome [BR:
msyl03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
126587860
Complex B
126587860
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
126587860
NCBI-ProteinID:
XP_050108900
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Position
2:complement(11279797..11285443)
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AA seq
517 aa
AA seq
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MGDFNNDAFMRGQNAAVQGRTKAQNRQNVLQLKMIGQSHPTGLTTNLLKLFEPRPPLDFK
PPPEKKKCPPLTGVAQFVSKFAEPGDPEYNPPVQKGETPTQRRARIHQLRLEKGAAKAAE
ELEKYDPNNDASISGDPYKTLFVARLNYETTESRIKREFDVYGPIKRVRLVADKETNKPR
GYGFIEYMHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGE
DVNQRYSGREQVQSGGQPRSEEPRAREERHVDLDREKSRERGKEKEKEREREKSRERSRE
RSHDKSRDRDHREDRHHRDRDRNRDKDRDRERDRGGRDRDRGRERGRDRGRDYEHGRDRD
RDRDRERDRDHRSRDRERDYEVGEPEHDRGRSHDRIESKHERVRHGDRERGYDHTAQEDD
QGWFEQPGHGHRHSEPDDDAEPYEHHRSQYDQLEVQHDDDRYKQYPDNAHDRYDRMEEDD
YHYEQAPADPRERERGGDVERDYQRSSRSLSRDYNEY
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgggagacttcaacaacgatgctttcatgcgcggccaaaacgccgccgttcagggccga
accaaggcccagaaccgccaaaatgttcttcagctcaagatgattgggcagagccacccc
actggtctaacaaccaaccttttgaagctgtttgagcctcgaccgccgttggatttcaaa
ccgcctccggagaagaaaaagtgcccacctttgacaggggtagcgcaatttgtgagtaag
tttgcggagcctggagatcctgagtataatccgcctgtccaaaagggtgaaactcctaca
caaagaagggctcgaatacaccagttaaggcttgagaagggtgcagcaaaggctgcggaa
gagttagagaaatatgatccgaataatgacgcaagcatttctggagatccatacaagact
ttgtttgttgctagactcaattatgagacaactgagagcagaatcaaaagggagtttgac
gtttatggtccaatcaagcgggttcgattggtcgctgacaaagaaacaaataaacctaga
ggctatggattcattgaatacatgcatacaagggacatgaaagctgcatacaaacaagct
gatgggaggaaaattgagggaagaagggtacttgttgatgttgaacgtggtagaacagtt
cctaactggcgaccccgccgactgggtggtgggcttggaactaccagagttggaggtgaa
gatgtcaatcagagatattctggaagggagcaagtacaatctggaggacaaccccggtct
gaggagccaagggcacgcgaggagcgacatgtagacttggatagagaaaaatcccgtgaa
agaggaaaagagaaagaaaaggaaagagaacgggagaagtcccgcgagcgctctcgtgaa
cgctcccatgacaagtctagagaccgtgatcacagggaagataggcaccacagagatcgt
gatagaaacagggacaaggacagggatagggaaagagatcgtggtggtcgtgatcgggat
cgtggtcgtgaacgaggacgggatcgtggtcgtgactatgagcatggtcgtgatcgagat
agagaccgtgatcgggagcgtgatcgtgatcatcgctctagagacagggagagggattat
gaagttggggagcctgagcatgatcgtggccgttcccatgaccgtattgaatcaaaacat
gagagggtccgacatggggatcgggagcggggttatgaccacactgcccaagaagacgac
cagggttggtttgaacaacctgggcatggccataggcactcagagccagatgatgatgct
gagccctatgagcatcatcgtagccagtatgatcaattggaagtccagcatgatgatgat
cgctacaaacagtatcctgacaatgctcatgatcgctatgatcgaatggaagaggatgat
taccattatgaacaagcaccagctgatccccgtgaaagggagaggggtggagatgtcgag
cgagattatcagaggtcatctagatcactatctcgagactacaatgagtattaa
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