Malus sylvestris (European crab apple): 126588021
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Entry
126588021 CDS
T09027
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126588021
Spliceosome [BR:
msyl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
126588021
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR
PPR_2
PPR_long
PPR_3
Motif
Other DBs
NCBI-GeneID:
126588021
NCBI-ProteinID:
XP_050109106
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Position
10:complement(12619188..12622193)
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AA seq
847 aa
AA seq
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NSKSPAPRTLSETSHASAQSSRAPELSPSTLSLTHSSSFFSTLCFSNPNLLSMRSSLFPP
LSLLRSLTLCLSHNQHHHPHTHPFSRPMSSFPLSTTKPFRFHALPSSSTSVEHLAGKASD
PEENWDLSNVAQSEVFDFENCFGSADLKHLGAPKLEVPELEELPEQWRRSKLAWLCKELP
AHKAGTLSRILNAQKKWIRQEDATYVAVHCMRIRENDVGFRVYKWMMQQHWYRFDFALAT
KLADYMGKERKFSKCRDIFDDIINQGRVPSESTFHILVVAYLSAPVQGCLEEACGIYNRM
IQLGGYQPRLHLHNSLFKALVSQPGTSSKHYLKQAEFIFHNLVTTGLEIHKDIYSGLIWL
HSYQDTIDKERMALLRKEMQQAGIEEGRDVLVSLLRACSKEGDVEGAESTWLRLCDLEVG
LPPQAYVYKMEAYSKAGVPLRSLEIFREMQEQLGSSNAVAYHKVVEVLCKAQEVEHVESL
MTEFINTGLKNFMPSYIDLMNMYFNLGLHDKLESAFSQCLERCRPSRTICSIYLDSLVKV
GNLAKAEEIFGLMQSDAAIGVNARSCNTILSGYLSSGDYVKAENIFDLMCQKKYDVEPPL
MEKIDYILSLSRKVVKKPVSLKLSKEQREILVGLLLGGLQIESDEDWKNHMIRFEFSESS
STHSLLKRHIFDQYHEWLHPSCKSSESTEDIPYKFSTISHSYFAFYAEQFWPKGRRMIPK
LIHRWLSPCALAYWYMYGGHSTSSGDILLKIKGSEEGVEKIVKSLRAKSLDCKVKRKGRV
FWIGFLGSSSTWFWKLVEPYILDDLKYALKGGQISDNSMVETENVNFGSGSDTNENASDY
SDNDNNL
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
aactcaaaatccccagctccaagaactctatcagaaacaagccatgcttctgcgcagagc
tccagagctccagagctctcaccctccactctctctctaacccactcctcctccttcttc
tccactctctgtttctctaaccctaatctcctctccatgcgctcttcactcttccctcct
ctctctctcctccgttccctcactctctgtctctctcacaaccaacaccaccaccctcat
acccacccattctccaggcccatgtccagttttccgctctccaccaccaaacccttccgg
ttccacgcccttccctcttccagtacttccgttgaacaccttgcaggcaaggcctcggac
ccagaggagaattgggatttgagcaatgtcgcgcagagcgaggttttcgattttgagaat
tgctttggttccgccgacttgaagcacctgggggcgccgaagcttgaggttcccgagctg
gaggagctcccggagcagtggcggaggtcgaagctggcgtggctgtgtaaggaactgccg
gcgcataaggccggtaccttgagtcgtatactcaatgcgcagaagaagtggataaggcaa
gaagatgccacttatgttgccgtgcattgtatgcggattcgggaaaatgatgtcgggttt
cgggtttacaaatggatgatgcaacaacactggtatcgttttgattttgctcttgctact
aagttagcggattacatgggtaaagagcgaaaattctcgaaatgtagggatatatttgat
gatataattaatcaggggcgtgttcctagtgaatctacatttcatatattggttgttgca
tatcttagtgccccggttcaaggttgcttggaggaagcatgtggcatttacaatcgtatg
attcagctaggaggttatcagccccggcttcacctgcacaattctctcttcaaagccctt
gtcagccaacccggaacctcttcgaaacactaccttaaacaggctgagtttatttttcat
aatttggtaacaactggactcgaaattcacaaggatatttatagtggattaatttggcta
catagctatcaggatacaatagataaagaaaggatggcattgttaagaaaagaaatgcaa
caggctggaattgaggagggcagagatgtgcttgtgtctctcttgagagcttgctcaaaa
gagggggatgtggagggagcagaaagtacttggctcagactttgcgatcttgaagttggt
ctcccacctcaggcatatgtttataaaatggaagcctattcaaaggctggagtgcctttg
agatccctggagatattcagggagatgcaagagcagttgggttcgtccaacgctgtcgca
tatcataaagtcgtagaggtcttatgtaaggctcaagaagttgaacatgtcgagtccctc
atgacagaattcatcaacactggtttgaagaatttcatgccgtcttatattgatctaatg
aacatgtacttcaacttaggcttacatgacaaactggaatcagccttctcccagtgcctt
gagagatgccgacccagccgtactatttgttctatatacttggattctttggtgaaagtt
ggtaatcttgctaaagctgaggagatctttggcctaatgcagagtgatgcggcaatcggt
gttaacgctcggtcctgcaacaccatattaagtggatacctgtcatctggagattatgtc
aaggcagaaaacatatttgacctgatgtgccagaagaagtatgacgttgaaccaccattg
atggaaaagattgattatatcttgagcttgagcagaaaggtagtcaagaaacctgtaagc
ctgaagctgagcaaagaacaacgagagattctagtaggtcttttgttgggtggtttgcag
atcgaatctgatgaagactggaaaaatcacatgatccggttcgagttcagtgagagttct
agcacacattctttgttaaagaggcatatatttgatcaataccatgagtggctacatcct
tcttgcaagtccagtgagagtacggaggacataccatataagttctcaaccatctcacat
tcgtattttgctttctatgcggagcagttttggccaaaaggccgaagaatgataccaaag
ctaatccatcgatggttgtcaccatgtgcgcttgcatactggtacatgtacgggggccac
agtacttcatcaggagacatattgttgaagataaagggtagtgaagagggtgttgagaag
attgtcaaatccttaagggcaaagtcccttgattgcaaggtgaagaggaaagggagagtg
ttttggataggttttctgggaagtagttctacctggttctggaaattagtagaaccttat
attctagatgacttgaagtatgctctaaaaggtggccaaatctcagataacagcatggtt
gaaaccgaaaacgtcaactttggtagtgggtctgatactaatgaaaatgcttctgattac
agtgataatgataataatttgtag
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