Malus sylvestris (European crab apple): 126588298
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Entry
126588298 CDS
T09027
Name
(RefSeq) novel plant SNARE 11-like
KO
K08494
novel plant SNARE
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126588298
Membrane trafficking [BR:
msyl04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
126588298
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
MCPsignal
Syntaxin_2
ING
DUF948
Med11
Occludin_ELL
Laminin_II
Prominin
Neur_chan_memb
MtrG
JHD
Vps53_N
DUF6988
CoV_S2
YkyA
Spectrin
Motif
Other DBs
NCBI-GeneID:
126588298
NCBI-ProteinID:
XP_050109330
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All DBs
Position
11:3170890..3176012
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AA seq
261 aa
AA seq
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MDPLSSISEELAEIDGQITDIFRALSNGFQKLEKIKDSNRRSRQLEELTEKMRDCKRLIK
EFDREVKNMERINDPNTSRMLNEKKQSMIKELNSYVALKKQYASNLDNKKIDLFDGPAED
LGEQNVLLASAMTNQQLIDNGNQMMDETDQAIERSKKVVHETINVGTETAHALKAQTEQM
SRIVNELDSIHFSIKKASKLVKEIGRQVATDRCIMGLLFLIVVGVIAIIIVKLVHPNNKD
IRDIPGLAPPAMTRKLLWNSY
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggatccgttatcttcaatcagcgaagagctggcggagatcgacggacaaatcaccgac
atttttcgcgcattatcaaatgggtttcagaagctggagaagattaaggactcgaatagg
cggagtaggcagctggaagagctcactgaaaagatgcgagactgtaagaggcttatcaaa
gaatttgacagagaagtgaagaatatggagagaataaatgatccaaataccagtagaatg
ctgaatgagaaaaagcagtcgatgattaaagagttgaattcttatgtggctctgaaaaaa
caatatgcatcaaaccttgacaacaagaaaattgatctctttgatggaccggccgaagac
ttgggggaacagaatgtcttgctagcctcggctatgacgaatcaacaacttattgataat
ggaaaccaaatgatggatgagacagatcaagccattgagagatcaaagaaggttgttcat
gaaaccatcaatgttggaacagagacagcacatgctctcaaggctcaaacggaacaaatg
agcaggattgtcaacgagctggactctatacatttctcaatcaagaaagcttctaagctg
gtcaaggaaattggtaggcaggttgcaactgataggtgtattatgggattactcttcttg
attgttgtaggcgtcatagccatcattattgtgaagctggttcatccaaacaacaaggac
attcgagatattcctggattagcccctcccgcaatgactcgaaagctactgtggaattct
tattga
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