Malus sylvestris (European crab apple): 126588443
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Entry
126588443 CDS
T09027
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT3-like isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00270
Cysteine and methionine metabolism
msyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
126588443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msyl03000
]
126588443
03032 DNA replication proteins [BR:
msyl03032
]
126588443
03036 Chromosome and associated proteins [BR:
msyl03036
]
126588443
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
msyl02048
]
126588443
Enzymes [BR:
msyl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
126588443
Transcription factors [BR:
msyl03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
126588443
DNA replication proteins [BR:
msyl03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
126588443
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
126588443
Prokaryotic defense system [BR:
msyl02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
126588443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Chromo
BAH
Motif
Other DBs
NCBI-GeneID:
126588443
NCBI-ProteinID:
XP_050109489
LinkDB
All DBs
Position
11:complement(893279..1012786)
Genome browser
AA seq
1248 aa
AA seq
DB search
MVCKRKSKAGTSSGSPPKSKNQRQTKKVRVEGEVPTSVEKATSPPKSKKTRQTKQERVEE
EVATSVEKSASSPKSKNARETKNARVEEEVATSVEKAASPTKLKKPRQTNKARVEEEVAT
SVEKAASPPKSKNPRQTRKARVEEEVATSVEKAASLPKLKNPRQTNKARVEEEVATSVEK
AASPPKSKNTRQTRNARVEEEVAKSVKKAASPLKLKKTRQTKEGGVEEEVVASVEKSACS
PKSKKPRQTKNARVEEELATSVDKAASPTKLKNPRQTNKGTVEEEVATSVEKCTSPLKLN
SPRLTRSARVEEEVATSVEKAASPTKSKNTRQTRKARVEEEVATSVEKAASPLKSKKTRQ
TKEGGVEEEAAASVEKSACSPKSKKPRQTKNARVEEEVVTSVEKAASLTKLKNPRQTNKA
TVEEEVATSVEKGASPPRKPVTQEVAAADEDGEESRFIGKPMEDEEARKQYPKRYAGEKP
QRNGQNNSNDDEDIIQACCHYTKALVDGISYDLYDDAHVQGETKEEPYICKIVEMFEAIG
GLLYFTAQWYYRSRDTVIKHCATVSCGRVFFSDVRDDNPLDCLVEKLHIVRLTLNVDEDV
KSKSIPVCNYYCDTKYLLPYSTFVNLPTENMQSGSDDSTISVEDDVCLDSEVDSKLSNGV
CAKSEVRLLDLYSGCGAMSTGLCLGAHLANVNLVTRWAVDYNEYACKSLEQNHPETEVRN
EAAEDFLTMLKEWRKLCMCLKLVETDNLEEDVEKSMLEFFRKEDDEVEDEGEEEEEDVSG
NENDDSEVFEVDCVVGVCFGDPKKNEKKGIYFKIHWKGYGPEEDTWEPMNELEHCKKAIK
AFITEGYRLKKLPLPGDVDVVCGGPPCQGVSGFNRFRNTESPLADEKNQQLEVYMDIVRY
LKPKFVLMENVVDILKFADGFLGRYALGRLVDMNYQARMGMMAAGAYGLPQFRMRVFLWG
ARPTEILPQYPLPTHDVISRGVIPTQFEGNAVAYDEGQKTQLAKSLFLEDAISDLPAVEN
NEERNEMPYGGPPKTEFQRLIRLSKEYLMGTSKDNSLQKVLYDHRPLQLNPDDYARVCEV
PKRKGACFRDFPGVRVRGDNKVEWDPEVPRVYLASGKPLVPDYAMSFVKGSSSKPFARLW
WDETVPTVVTRAEPHNQAIMHPEQDRVLTIRENARLQGFPDFYRLSGPVKERYMQVGNAV
AVPVARALGYALGLALRRSAGADPVFILPESFPNIQDQVHSASSEEAD
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgcaagcggaagtcgaaggccggaacttcttcaggttctccgccgaaatcgaag
aaccaaaggcaaaccaagaaggtgagagttgagggcgaggtacccacgagtgttgaaaaa
gctacttctccgccgaaatcaaagaagactaggcaaaccaagcaggagagagttgaagag
gaggtagcaacgagtgtggaaaaatctgcttcttctccgaaatcgaagaatgcaagggaa
acaaaaaatgcgagagttgaggaggaggtagcgaccagtgtggaaaaagctgcttctccg
acgaaattgaagaaaccgaggcaaaccaacaaggcgagagttgaagaggaggtagcaacg
agtgtggaaaaagctgcttctccgccgaaatcgaagaacccgaggcaaaccaggaaggcg
agagttgaagaggaggtagctacgagtgttgaaaaagctgcttctttgccgaaattgaag
aatccgaggcaaaccaataaggcgagagttgaagaggaggtagcaacgagtgtggaaaaa
gctgcttctccgccgaagtcgaagaacacgaggcaaaccaggaacgcgagagttgaagag
gaagtagctaagagtgttaaaaaagctgcttctccgttgaaattgaagaagacgaggcaa
accaaggagggaggagttgaagaggaggtagtggcgagtgtggaaaaatctgcttgttct
ccaaaatcgaagaagccgaggcaaacaaaaaatgcgagagttgaagaggagctagcgacg
agtgtggacaaagctgcttctccaacgaaattgaagaatccgaggcaaaccaataagggg
acagttgaagaggaggtagcaacgagtgtggaaaaatgtacttctccgctgaaattgaac
agcccgaggctaaccaggagtgcgagagttgaagaggaggtagcaacgagtgtggaaaaa
gcagcttctccaacgaaatcgaagaacacgaggcaaaccaggaaggcgagagttgaagag
gaggtagctacaagtgttgaaaaagctgcttctccgctgaaatcgaagaagacgaggcaa
accaaggagggaggagttgaagaggaggcagcggcgagtgtggaaaaatcagcttgttct
ccaaaatcgaagaagccgaggcaaacaaaaaatgctagagttgaagaggaggtagtgacg
agtgtggaaaaagctgcttctctgacgaaattgaagaatccgaggcaaaccaataaggcg
acagttgaagaggaggtagcaacgagtgtggaaaaaggtgcttctccgccgaggaagcca
gtgactcaggaggtagctgcggctgatgaagacggagaggaatcgaggtttattggcaaa
ccgatggaagatgaggaggctcgtaagcaataccccaaacgatatgcgggagagaagcca
cagaggaatgggcaaaacaactccaacgatgatgaagatatcattcaagcttgttgtcac
tacacaaaggcgttggtggatggaatcagttatgatctctatgatgatgcccacgtgcaa
ggagagacgaaagaagaaccctacatttgtaagattgtggaaatgtttgaggcaattggt
gggctattatattttactgcacaatggtactatagatcacgagacactgtcataaagcac
tgtgctactgtttcttgtgggcgtgtattcttttcagatgtccgagatgacaaccctctg
gattgtcttgttgaaaaacttcatattgttaggctgacactaaatgttgatgaagatgtg
aagagtaaatcaattccagtgtgcaattactattgcgacaccaagtatttgctaccatat
tctacttttgtcaatctgccaacagaaaatatgcagtctggaagtgatgactcaactatc
tctgttgaggatgatgtttgtttggatagtgaggttgattcaaagctgtcaaatggagtg
tgtgccaaatcagaagtaaggctcctggacctatactctggttgtggagcaatgtctact
ggcctgtgccttggtgcacatttggccaatgtcaatcttgttacaagatgggctgttgac
tacaatgaatatgcttgtaagagtctagaacaaaaccatccagagacagaggtccgaaat
gaagctgctgaagatttcctcacaatgctcaaggaatggagaaaattgtgcatgtgctta
aagttggttgagactgacaatttagaggaggatgtagagaagagtatgcttgaattcttt
agaaaggaagatgatgaagtggaagatgagggagaagaagaggaagaagatgttagtgga
aatgagaatgatgattctgaagtttttgaagttgattgcgtggtaggagtatgttttggt
gaccccaaaaaaaatgaaaagaagggaatatactttaagattcattggaagggctacggg
cctgaggaagacacctgggagccaatgaatgaattggagcattgcaagaaggctatcaaa
gcctttattactgaaggttacagattgaaaaaattgcctttaccgggtgatgttgatgtg
gtgtgtgggggacccccttgccaaggagttagtggtttcaacaggtttaggaacacagaa
agtccattagccgatgagaaaaaccaacagttagaggtgtacatggacatagttcggtac
cttaagccaaagtttgttttgatggaaaatgttgtcgatattttaaaatttgccgatgga
ttccttggacgatatgccttgggacgccttgtagatatgaactatcaagcgaggatggga
atgatggcagctggtgcctatgggcttccacagttccgtatgcgagtttttttgtggggg
gcccgtcctactgagatcttgccccagtaccctcttcctacgcatgatgttatttcaagg
ggtgttatccctacacaatttgagggtaatgctgttgcttatgatgaaggtcagaagact
caactagcaaaaagtctttttctggaggatgcgatttctgatctgcctgctgttgaaaat
aatgaagaaagaaatgagatgccatatggggggccacccaagacagagtttcagaggctt
atacgactaagcaaagaatacctaatggggacttcaaaggacaactctttacagaaggtt
ctttatgatcatcgccctttgcagttgaatcccgatgattatgcacgtgtctgtgaagtt
ccgaagagaaagggtgcatgcttcagagatttcccaggtgttcgtgtgcgcggtgataac
aaggttgagtgggatccggaagtacccagggtgtatttggcttctgggaaaccattggtc
ccagattatgctatgagtttcgtgaaggggtcttcatcaaaaccttttgcccgcttgtgg
tgggacgaaactgtgccaacagttgtgacaagagctgaaccacataaccaggcaattatg
catcctgagcaagatagggtgctgacaattcgtgagaatgctaggctacagggctttcca
gatttttacaggctcagcgggcctgtaaaagaaaggtacatgcaagttggaaatgctgtc
gctgttccggttgcgcgtgcactgggctatgcattaggtcttgctcttagacgttctgct
ggtgctgatcccgtgttcatattacctgaaagtttcccaaacattcaggatcaggttcat
tcggcgtcatctgaagaagcggattga
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integrated database retrieval system
