Malus sylvestris (European crab apple): 126588459
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Entry
126588459 CDS
T09027
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126588459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126588459
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126588459
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
126588459
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
FAIM1
Motif
Other DBs
NCBI-GeneID:
126588459
NCBI-ProteinID:
XP_050109507
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All DBs
Position
11:complement(1209722..1213511)
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AA seq
308 aa
AA seq
DB search
MSPGGRFCEDVAESRMAFADTDVATSTADLRASPFRKAAAGLIGNPGLPPNSNVHDLLEC
PVCMNLMCPPIHQCPNGHTLCSSCKVRVHNCCPTCRNELGNIRCLALEKVAESLDLPCRY
QIYGCQDIFPYYSKLKHEKICNYRPYSCPYAGAECSVTGDIQFLMMHLKNDHKVDMHDGS
TFNHRYVKSNPQEVENATWMLTIFNCFGRQFCLHFEAFHIGTAPVYMAFLRFMGDDDEAK
QFTYSLEVSGSGRKLMWQGIPRSIRDSHRKVRDSQDGLIIQRNLALFFSGGSRQELKLKV
AGRIWKEH
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctggaggtcgcttctgtgaagatgtggccgagtctcgtatggcatttgcagat
actgatgttgcaacttccactgctgatctaagggcttcccctttcagaaaagctgctgct
ggtttgattggaaatcctggactgccaccaaatagtaatgtgcatgatctactcgagtgt
cctgtttgcatgaatttaatgtgtcctccaattcaccagtgtccaaatggccatactctt
tgctcgagctgtaaggtcagagtgcacaactgttgccccacttgtcgaaacgaacttgga
aatataaggtgcttggcactggagaaagtagcagagtctctggatcttccttgtagatac
caaatttatggttgccaagatatattcccatactacagcaagctaaagcatgagaaaatc
tgtaactatcgtccatacagctgcccttatgctggagctgaatgttctgtcactggagat
atccaattccttatgatgcatcttaaaaatgatcacaaggtcgacatgcatgacgggagt
actttcaaccacagatatgttaaatccaatccccaagaagttgaaaacgctacatggatg
ttgacaattttcaactgttttggccgtcagttttgcttgcattttgaggcattccacatt
ggaaccgcaccggtttacatggcattcctaaggttcatgggcgatgatgatgaggcgaag
caattcacttatagtcttgaagtcagtggcagtggtagaaagctcatgtggcaaggaatt
cctcggagtatccgagatagccaccgaaaggtccgtgacagtcaagacggactaattatt
cagaggaacttagcactcttcttctcgggtggtagtaggcaggagctgaagctgaaagtc
gccggccgtatatggaaagaacactga
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