Malus sylvestris (European crab apple): 126588824
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Entry
126588824 CDS
T09027
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126588824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126588824
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
126588824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
126588824
NCBI-ProteinID:
XP_050109912
LinkDB
All DBs
Position
11:28092486..28096081
Genome browser
AA seq
476 aa
AA seq
DB search
MEPDHGKLFIGGISWDTDEERLKEYFRKYGEVVEAVIMRDRATGRARGFGFVVFADPAVA
ERVVMDKHMIDCRTVEAKKAVPKEDQHILNRTGVVNGSPGPGRTKKIFVGGLASTVTESD
FKKYFDQFGTVTDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRA
VPKELSPGPSRSPMIGYNYSPGRTNSLLNSYAQGYNTSPIGGFGINVDTRFNPISSGRSG
LSPFGTSGYGIGMNMEPGLSPTYGGNSNFGSSLGYARMLSPFYSGNSNRYSTPIGYNAGN
GRRSPVVNSTTRNVWRNSGINNNSNPASTGACLSSANGGFEVTIGNNGSNWGANSFSTEG
RGSDSGYNSANGYGSGGSSFGLGGGGYGRNGGTGIAPTSSFPGSTVGYEGFYGDLYQNGS
VYGDSTWRSSSPDLDGSSTFGYGLSDLPADITAKSSGGYIGGYNVTSTQPNRGVAA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggaaccagatcatgggaagctcttcattggtgggatttcctgggacacagatgaggaa
cggctcaaggaatatttcaggaagtatggagaggtggtggaggctgtgatcatgagggat
cgtgcaaccggtcgtgctcgtggattcgggtttgttgtctttgcggatcctgcggttgca
gaaagagttgtcatggataagcacatgatcgattgccgcacagtggaagcaaagaaggct
gttcctaaggaggatcagcacattttaaacagaaccggggttgtcaatggttccccgggt
cctggacgcacaaaaaagatttttgttggaggtttagcatccacagtgaccgagagtgac
tttaagaagtactttgatcaatttggtacagtcactgatgttgtagtaatgtatgatcac
aacactcaaaggccaagaggcttcggatttatcacttatgactcggaggaggctgttgac
agagttctgcataaaacatttcatgaactcaatggtaagatggttgaggtcaagcgggca
gtccctaaggagctatccccaggacccagccggagccctatgataggatacaactatagt
ccgggtaggaccaatagtttgcttaacagctatgctcagggttataatactagcccaatc
ggaggttttggcattaatgtggacaccaggttcaatccaatctctagtggtcgtagcggg
ttgtctccatttggcacttctggatatggaataggtatgaatatggagccagggttgagc
ccaacctatggcggaaattccaactttggcagtagtctaggatatgcacggatgttgagc
cccttttatagtggcaattcaaacaggtatagtacccctattggatataatgccggtaat
ggaaggagaagtcctgtagtaaactcgactactcggaatgtctggcgaaatagtggcatc
aacaataactcgaaccctgccagtaccggggcctgcttgagctctgcaaatggaggtttt
gaagttacgattggaaacaatggttcaaattggggcgctaattctttttcaactgaaggt
agaggcagtgattctggctataatagtgccaatggttatggaagtggaggtagcagcttt
gggttgggaggaggaggatatggaagaaacggtggcactggtatagccccaacttcatca
tttcccggatcaactgttggttatgagggcttttatggggacttgtaccagaacggttca
gtttatggcgactcaacttggcgctcaagcagtcctgatctagatggttctagcacattt
ggttatgggctgagcgatttacctgcagacatcacagccaaaagttctggtggctatatt
ggaggttacaacgttaccagtacacaaccaaatagaggagttgctgcttag
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