Malus sylvestris (European crab apple): 126588881
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Entry
126588881 CDS
T09027
Name
(RefSeq) TATA-binding protein-associated factor BTAF1-like isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126588881
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
126588881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_ECM29
TOR1L1_N
HEAT_2
HEAT_EZ
TPR_Trm732_C
ResIII
mTOR_dom
ARM_ECM29
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
126588881
NCBI-ProteinID:
XP_050109979
LinkDB
All DBs
Position
11:complement(2150..25877)
Genome browser
AA seq
2039 aa
AA seq
DB search
MAQQSSRLHRLLTLLDTGSTQATRFTAARQIGDIAKAHPQDLSSLLKMVSQYLHSKNWDT
RVAAAHAVGAIAENVKHTSLIELFTCIKSKMSDAGISGAVEDMVAFPIFDSNIAGTSFRS
FDLRKVLEFGALFASGGQEYDVANDHMKNPREKLARQKQTLQCRLGLDICEQFMDVNDMI
KDEDLISHNSHGNGTYPRVCTSHNIQQLVANMVPSVVSERPSPRELNLLKRKAKITSKDQ
SKGWSDDGDMEVPCAQNIPPKGACPDSFGTNKEILDFDNHEEKIEHDGEGRWPFQSFAEQ
LILDMFDQVWEVRHGSVMALREILTHQGASAGAFISDLSLEGAMIGELENKCTASTMKRD
REIDLNMQVPIDESEPELKKLKFEGVTSPFVDTMVSSSKSGDFDVSIQVEDSGCKSPSAQ
VNGQLHFSSVKVDPCEQLAQTTELKGQSHNKGSFQKMDVLKRLSENSDMMNLVKLARHSW
LKNCEFLQDCAIRFLCVLSLDRFGDYVSDQVVAPVRETCAQALGVVFKYMHPSLVHETLN
ILLKMQCRPEWEVRHGSLLGIKYLVAVRQEMLHNFLDRVLPACKAGLEDPDDDVRAVAAD
ALIPTSAAIVALKGETLHSIVMLLWDILLDLDDLSPSTSSVMNLLAEIYSQEDMIPWIFE
DLTSKEFDLNEFSSIDDTGEGLISHDNPFMLSTLAPRLWPFMRHSITSVRYSAIRTLERL
LEAGYKGSISESSSTSFWPSFILGDTLRIVFQNLLLESNDEILKLSERVWRLLVQCPLGD
LEIAARLYMSSWIELATTSYGSALDSTKMFWPVALPRKSHFKAAAKMRAVKLENESCRNI
GLESSKGSIPEEKGGDASTNNVQIVVGADVEMSVTHTRVVTAAALGVFASRLHEGSMQYV
IDPLTDAFTSLSGVQRQVASMVLISWFKEIKRAGVFENAGVMPGFLNHLKNLMLDFLACL
EPAFPTNDPCLPYAELSRTYCKMRSEASQLLNTIQSSGMFQSLLSTTKIDLEKLNVDNAI
NFASKLPMLCNDIGGNNSFERHIVDDIESAKQRLLTTCGYLKCVQSNLHVTVSSLVAASV
VWMSELPERLNPIILPLMASIKREQEEILQEKAAEALAELISHCISRSRSPNDKLIKNIC
NLTCMDPRETPQAAVICSLDIIDDQDLLSFGTNTGKQKSKVILAGSEDRSKVEGFISRRG
SELALRHLCMKFGASLFDELPKLWDCLTEVLKPSSIQSLNPADEKKITQTLESVKDPQTL
INNIQVVRSIASMLNEDLKPKLLTLLPYILKCIRHSHVAVRLASSRCITTMAKSKEMHVM
GAVIENAIPMLGDMTSVGARQGAGMLISLLVQGLGVELVPYAPFLVVPLLRCMSDCDQSV
RQSVTRSFAALVPLLPLARGLPLPVGLTEGFSRSAEDATFLEQLLDNSHIDDYKLCTELK
VTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQALAIVASDIVEHQTLNDGNLPSS
LIICPSTLVGHWAFEIEKYIDLSVISTLQYVGSAQERIALREHFGKHNAIITSYDVVRKD
IDYLGKLIWNYCILDEGHVIKNAKSKVTLSVKQLKAQHRLILSGTPIQNNVMDLWSLFDF
VMPGFLGTERQFQATFGKPLVAARDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVL
SDLPEKIIQDRFCDLSPVQLKLYEQFSGSHVRQEISSIVKQNETADTGGHSESPRASSHV
FQALQYLLKLCSHPLLVLEKKVPDSIACLLSELLPGGSDTISELHKPYHSPKLVALQEIL
EECGIGVDASSSEGAISVGQHRVLIFAQHKAFLDLIERDLFHTHMKSSVTYLRLDGSVEP
EKRFDIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRL
GQKKVVNVHRLIMRGTLEEKVMSLQKFKLSVANAVINAENASMKTMNTDQLLDLFATAET
SKKGTSILKHPDGKFDGDVKLMGTGKGLKAILGGLEELWDQSQYTEEYNLSNFLAKLDG
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcagtcctctcgtctccaccgccttctcactctcttggacactggttcaacc
caagcgacgagatttacggctgctcggcagataggggacattgccaaagcgcatcctcag
gacttgagctctctgttgaaaatggtttcacaatatcttcatagcaaaaactgggataca
agggttgctgccgctcatgctgttggggctattgctgagaatgtgaagcacacctctttg
attgaactctttacttgtattaaatcgaagatgtctgatgctgggatatctggtgctgtt
gaagatatggttgctttccctatttttgattcaaacattgctggcacgtcatttagaagc
ttcgatctcagaaaggttttggagtttggtgctctgtttgcatctgggggacaggagtat
gatgttgcaaatgatcatatgaagaacccaagggagaaattggctcgacagaaacaaaca
cttcaatgtcgtttaggtttggatatatgtgagcagttcatggatgtgaatgatatgata
aaagatgaagaccttatttcacacaactcgcatgggaacgggacatatccaagagtttgt
acatcacataatattcagcaattagttgcaaatatggttcctagtgtcgtatcagaaagg
ccaagtccaagggaattgaatcttttaaaacgaaaagcaaaaatcacttcgaaagaccag
tcaaaaggttggtctgatgatggggatatggaggttccatgtgctcaaaatataccacca
aagggggcatgtcctgactcatttgggactaacaaggaaattttggacttcgataatcat
gaagaaaaaattgaacatgatggagaggggcggtggccttttcaaagcttcgctgagcaa
ctaatcctagatatgtttgatcaagtttgggaagtacgccatggtagtgtgatggctttg
agagaaattttaacccatcaaggtgcttctgctggagcatttatttctgatttgagcctg
gagggtgcaatgattggggagttagaaaataaatgcacagcatctacaatgaagagagac
agagagattgatttgaatatgcaagttcccattgatgaatctgaaccagaactgaaaaag
ctgaagtttgaaggtgttacatctccatttgtggataccatggtctcttccagcaagagt
ggggattttgatgtcagtatacaggtagaagacagtggttgtaagtcgccttctgcgcag
gttaatggtcaacttcatttcagctctgttaaggtggacccatgtgagcaactagctcag
acaactgagttaaagggccagtctcacaataaggggtcctttcagaaaatggatgtgctg
aagaggctctctgaaaatagtgatatgatgaacttggttaaactggctaggcattcatgg
cttaaaaattgcgaattccttcaagattgtgcaattcgtttcttgtgtgtcttgtcacta
gaccgttttggagattatgtctctgatcaggtagttgctccagtacgtgaaacctgtgct
caagcattgggtgttgtgttcaaatacatgcatcccagtttagttcatgaaacattgaac
atcttgctgaagatgcagtgtagaccagaatgggaagttcgtcatggaagcctattgggt
attaagtatctagttgccgtacggcaggagatgcttcataattttcttgaccgagtcctg
cctgcatgtaaagctggcctggaggaccccgatgatgatgttcgagcagtagctgcggat
gctttgatacctacctcagctgctattgttgctttaaagggtgaaactttgcattctata
gtgatgttactatgggatatattacttgatttggatgatttaagtccatccactagcagc
gtaatgaatctgttggcggaaatatattcccaggaagacatgattccttggatttttgag
gatttgacatcgaaagagtttgatttaaatgaattcagtagcattgatgatactggagaa
ggattaatttcgcatgataatcctttcatgttatcaacacttgcaccacggttgtggccc
tttatgaggcatagtatcacatcagttcgttattcagctatccgcacgttggaacgacta
cttgaagcaggatacaaagggagcatctctgagtcttcgagtacttcattttggccatct
tttattttgggtgatacccttcggattgtttttcagaatttactgcttgaatcaaatgat
gaaattttgaaactttcagagagagtttggaggctccttgttcagtgtccattaggggac
ttggaaattgctgcaaggttatatatgtcctcttggatagaacttgcaactacttcgtat
ggttcagcattagattctacaaaaatgttttggcctgttgctctcccacgaaagagtcat
tttaaagcagcagctaaaatgagagctgtgaagcttgaaaatgagtcttgtagaaacatt
gggttggaatcttcgaagggatccattccagaggaaaaaggtggagatgcttcaaccaat
aatgttcagatagttgttggtgcggatgttgaaatgtctgtgactcatacccgagtggtt
actgcggcagcattgggagtttttgcttctagattgcacgaaggctcaatgcagtatgta
attgatccactgactgatgcctttacctctttatctggtgtccagcggcaggtggcatct
atggttcttatttcttggttcaaagagattaaaagggcaggtgtgtttgaaaatgctgga
gtcatgccaggttttctgaaccatctcaaaaatttgatgttggatttcttggcatgcctt
gaacctgcattccctacaaacgatccatgtcttccttatgccgagctttcaagaacgtat
tgtaagatgcgttcggaggctagtcagttgttaaatactattcaatcatcgggtatgttt
cagagtttgttgtctactaccaaaattgacttggaaaagttgaacgtggacaatgcaatt
aattttgcatcgaaacttccaatgttgtgtaatgatattggggggaacaattctttcgaa
aggcacattgttgatgatatagagtcagcaaaacaacgacttctgacaacttgtggatat
ttaaaatgtgttcagagcaatctacatgttactgtctcttctcttgttgctgcttctgtt
gtttggatgtcagagcttcctgaacgactaaatcccattattttgcctttgatggcttct
atcaaaagagaacaggaggaaatactacaagagaaggcagctgaggcacttgcagagctt
atttctcactgtatttcacgtagccgaagcccaaatgataagttaattaagaatatatgt
aatttaacatgtatggatcctagagaaacacctcaagctgcagtcatctgttccttagat
attattgatgaccaagatctcctatcttttgggacaaatactggtaagcagaaatcaaag
gtcattctggctggaagcgaagatcgctcaaaggttgagggatttattagtagacgaggt
tctgaacttgccttgaggcatctttgtatgaagtttggtgcttcattatttgacgagctt
ccaaaactttgggattgcctcactgaagtgcttaagcctagtagtattcagtcccttaat
cctgcagatgaaaagaaaattacacaaactctggaatctgtgaaggatccccagaccttg
ataaataatatccaggtagtacgttctattgcttcaatgctaaatgaggatctgaaacca
aaactactcacccttcttccatacatattgaagtgcattcgtcattcccatgttgctgtt
agattggcttcctctagatgcatcaccacaatggccaagtcaaaggaaatgcatgtgatg
ggagctgtaattgaaaatgccatacccatgttaggggatatgacatctgttggtgccaga
caaggtgcaggcatgcttattagtttgcttgtccaaggattgggtgtggagctggttcca
tatgctcctttcttagttgtccctcttttaaggtgtatgagtgattgtgatcagtctgtg
agacagagtgtgactcgcagttttgctgctcttgtacctcttcttccacttgcacggggc
ctccctctacctgttggactaactgaaggtttctccagaagtgcagaagatgcaacattt
ctggagcaactacttgacaactcccatattgatgattacaagctttgtactgaactgaaa
gtgacactgagaaggtatcaacaggaaggcataaattggttagcctttttaaaacgtttc
aagcttcatggaatcttatgtgatgatatgggtcttggtaagacacttcaagcattggct
attgtggcttctgatatagtcgaacatcaaactttgaatgacggcaatcttccatcatct
ttaattatctgcccatcaacacttgttggacattgggcctttgagatagagaagtacatt
gatctttccgtaatatctactctccaatatgttggttctgctcaagagcgcattgcactt
cgagaacattttggaaagcataatgcaataataacatcatatgatgtggtccgcaaagat
attgattatcttgggaagcttatctggaactattgtatcttagatgaaggacatgtgatc
aagaatgcaaagtcaaaagttacactttcagtgaagcaattgaaagcccagcatcgtttg
atattgagtggaacaccaatccagaataatgtcatggatttatggtccctttttgatttc
gtaatgcccggctttcttggaacagagaggcagttccaagccacttttgggaaaccactg
gtggcagccagagatcctaagtgctctgcaaaggatgctgaagcaggagcacttgcgatg
gaagcattgcacaagcaggtcatgcccttcctcctccgtcgaacaaaagatgaagtcttg
tccgatcttcctgagaaaattattcaggacaggttctgtgacctgagccctgtacaattg
aaattgtacgaacagttttctgggtcacatgtgagacaagagatctcaagtattgtgaaa
caaaatgagacagcagatacaggagggcatagtgaatcacctagagcttcatcccatgtt
tttcaggcacttcagtacttgcttaaactatgcagtcacccattgcttgttcttgaaaaa
aaggtcccagattcaattgcatgccttttgtcagagctactaccgggaggctctgataca
atttcagaattgcacaagccataccactctcccaaactagttgcacttcaggagattctt
gaagagtgtggaataggtgttgatgcttctagttctgaaggtgccataagcgtggggcag
cacagagtcttgatatttgctcaacataaagcatttctggacttaatagaaagagactta
tttcatactcatatgaagagcagtgtaacctacttgcggctggatgggtcagttgaacct
gaaaaacgttttgatattgtcaaagctttcaattcggatcctacaatcgatgtcctgcta
ctcacaacccatgttggtgggctgggcttgaacctgacatctgcagacacacttgttttc
atggagcatgactggaaccccatgcgggatcatcaggcaatggacagagcacacagatta
ggtcagaaaaaagttgtcaatgtccatcgccttattatgcgtggcactctcgaagagaaa
gttatgagcttgcaaaagtttaagctttcagtagctaatgcagtcattaatgctgaaaat
gctagtatgaaaaccatgaatacagaccaactgcttgatctatttgctactgcagaaacg
tccaaaaagggaacttctatattaaagcatcccgatggaaaatttgatggagatgtgaaa
ttaatgggcactggaaaggggttgaaagcaattcttggtgggctggaggagttgtgggat
caatcacagtacaccgaagaatacaatctcagtaacttcttggcaaagcttgatggttga
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integrated database retrieval system
