Malus sylvestris (European crab apple): 126588911
Help
Entry
126588911 CDS
T09027
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126588911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126588911
Spliceosome [BR:
msyl03041
]
Common components
Common spliceosomal components
SR proteins
126588911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
SRP-alpha_N
Motif
Other DBs
NCBI-GeneID:
126588911
NCBI-ProteinID:
XP_050110019
LinkDB
All DBs
Position
11:40603931..40608461
Genome browser
AA seq
300 aa
AA seq
DB search
MSSRSTSRTLYVGNLPGDVREREVEDLFFKYGRIAHIDLKVPPRPPGYAFVEFEDSRDAE
DALRGRDGYDFDGHRLRVELAHGGRGHSSSSDRQSNYSGGRGGRGMSKRSDYRVLVSELP
PSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNLEDMKYAIKKLDGSEFRNAFDR
QSVRVREYDAKRDSSRSPSRGRSRSKGRSYSRSRSPSYSRDRSRSKSPKTKSSRRSPARS
RSRSASLPGSRSRSRSRSKSPVPSKRISKSPKKHLSKSPKKRSASRSPIRSRSRSKSLSR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcgtagtacaagcagaactctctatgttgggaatctgcccggtgatgtacgc
gagagagaggtggaagacttgtttttcaagtatggacgcatagcccatattgacctgaag
gtccctccaaggcctcctggttatgcatttgttgagtttgaagactctcgtgatgctgaa
gatgcactccgtggtcgtgatggctatgattttgatgggcatcgtttacgggttgaactt
gcacatggagggcgtgggcattcatcttcttcagatcgtcagagtaactatagtggtggt
cgaggtggacgtgggatgtctaagcgctcagattatcgtgtgttagtcagtgaacttccc
ccttccgcttcatggcaagatcttaaggatcacatgcgacgggcaggagatgtctgtttc
tcccaagtttttcgtgatggtagtggcacaactgggattgtggattacacgaacttagaa
gatatgaagtatgcgatcaaaaagcttgatggctctgagttccggaatgcttttgaccgc
caatctgttcgtgtgagggaatatgatgcgaagagggactcatctaggagccctagtcgc
ggtcgatctcgttcaaaaggcaggagctacagtcgcagtcgtagtccaagttatagccgg
gacagaagcaggagcaagtctccaaaaaccaaatcttcacgccgctcacccgctagatct
cgatcaagatcggcttctctccctggttcacgatcaagatcaagatcaagaagcaaatct
ccagtgccttcgaaacgcataagtaaaagcccgaagaagcaccttagtaaaagtccaaag
aagcgtagtgccagcaggagtccaatccggagcaggagcaggagcaagagtttgtcacgg
tga
DBGET
integrated database retrieval system
