Malus sylvestris (European crab apple): 126588915
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Entry
126588915 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126588915 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
msyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126588915
03015 mRNA surveillance pathway
126588915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126588915
03041 Spliceosome [BR:
msyl03041
]
126588915
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126588915
Spliceosome [BR:
msyl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
126588915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
126588915
NCBI-ProteinID:
XP_050110028
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All DBs
Position
11:complement(7753931..7759161)
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AA seq
851 aa
AA seq
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MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDITKVSMDVMRPWIANRVTELL
GFEDEVLINFIYGLLEGKVVNGKEIQISLTGFMEKNTVKFMKELWTLLISAQNNASGVPQ
QFLDAKQEEARKKKEEADRFASEIQRKKEKERIDQQEILKKMEEGADKKANSAALEPSTK
HMSPRDSNDCYEDERGAEKRIGVKARNKVSRSPNSENSSLSPRERHRSRSISKSPKALRR
SISSDRSDRSPPRRPITTVQRHSPEGSTSPRGRSRYSRQRSRSNSQQRSPSPYRRRVRSP
YWRRPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPS
PVRRRRSPSPVRRPRSPSPVRRPRSPSPVRRPRSPSPVQRRRSPSPLRRRRSRSPVRRRS
PSPVRRAYRRSPLNTRNRYVSPLQHRSPVRSRRSPTPPHRSPSLHDRSSSPIQHGSPSLI
RRTSKLQRSPSQSPQERTRSREKISPVPRQSSSYGSLQRELKNGNDSRKRAPDLSPSPVR
SRLLSESPPGVRSDSEEKRRRLSSPDKSPVRRPREQMTHDVSSSPPRKPREQQLRRGSPD
ISEDKLIASPAKVRNKEEYSRNRLDNKDLRNKEQEMKSGKSSGRVVPESPDQQQAPTIYK
DSLRGEMQNPDEGRKSDEKNRSHSKNSKDSDRHRKTGSVHSSIEKVDHSNRSGIVDSGSE
ESEKCRGGEKGKRKNKRSERQEVTSDDDYSNDSEIDERKDAKRRKKEEKRSRKEKKRRRR
EERRRRKEERRAGKMKGKNYSDASASDGEHVGRRELHSNDNEEKEDGQKKLEIELRKKAL
ESLKAKKGISH
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgggtttttcaggggtacgtccgctgatcaggacactaggttttccaataag
caagcgaagctgatgaaatctcagaaatttgcacctgaattggaacatttggtcgatata
acgaaggtgagtatggatgttatgcgcccgtggattgctaatcgagtaacggagcttctc
ggattcgaagatgaagttctcatcaactttatctatggtcttttggaaggaaaggtggtg
aatgggaaggagattcaaatctcgcttactggatttatggagaaaaacactgtgaagttt
atgaaagagctttggacgctgcttatcagtgcgcagaacaatgctagtggcgttcctcaa
cagtttttagatgccaaacaagaagaagcacggaaaaagaaggaggaggcagacaggttt
gcaagtgaaattcagagaaagaaagagaaggagaggatagatcaacaagagatattgaag
aagatggaagaaggggctgacaagaaagcaaacagtgctgcattggagccaagcacaaag
catatgtcgccaagggattcaaatgattgttatgaggatgaaagaggagctgaaaagagg
attggtgtgaaggcaaggaacaaggtttccagatctccaaattctgaaaattcatctttg
tctcctcgtgaaagacaccgatcaagaagtatttccaagtcaccaaaagcattgagacga
tccatttcttctgataggagtgatcgctctccacctagacggcctattacaactgttcag
aggcattcgccagagggatcaacctccccaagaggaagatcacgttattccaggcaaaga
tctagatcaaattcccaacaaagatcaccctctccgtatcggcgtagagtacgttctcca
tattggcgtagaccttcacctgtcaggcgccgcagatcaccatcacctgtccggcgccgc
agatcaccatcgccagtccggcgccgcagatcaccatcgccagtccggcgccgcagatca
ccttcgccagtccggcgccgcagatcaccttcgccagtccggcgccgcagatcaccctcg
ccagtccggcgccgcagatcaccctcgcctgttcgacgtcccagatcaccctcgcctgtg
cgacgtcccagatcaccctcacctgtgcgacgtcccagatcaccctcacctgtgcagcgt
cgcaggtcgccctctcctttgcgacgtcgcagatctcgctcacctgtgcgtcgcagatca
ccctcacctgtacgacgggcgtatcgaagatccccattgaatacacggaacaggtatgtg
tctcccttgcaacataggtcaccagttcgtagcaggaggtcaccaactcctccgcatagg
tctccgtctctgcatgatcgaagttcatctcctattcaacatggttccccctcgctaatc
aggagaacatcaaagcttcagagatctccctcacaatctcctcaagaaagaaccaggtcc
cgtgaaaaaatttctcctgtgccacgccagtctagctcgtatgggtcattgcagagggaa
ttaaagaatgggaatgattcgcgtaaaagagcaccagatttgtcgccatcaccagtgagg
tctcgtttactctcagaatctccaccaggcgtaagaagtgatagtgaagaaaagagaaga
agattatctagcccagataagagtccagttagacgaccaagggagcaaatgactcatgat
gttagctcaagtcctccaaggaaaccaagagaacaacaacttcgtcgtggaagtccagac
ataagtgaagataagctgatagcctctcctgctaaggttcgtaacaaggaagagtactct
cgaaaccgtctggataacaaggacttaagaaacaaggagcaggagatgaagagtggcaaa
tcttctgggagggtggttcctgaaagtcctgatcaacaacaggctccaaccatatataag
gactctctacgtggtgagatgcaaaatcccgatgagggtagaaagtctgatgaaaagaac
cgttctcattcaaaaaattccaaggacagtgatcggcatcgcaaaactggatctgtgcac
tcatccattgaaaaggttgatcatagtaatcgaagtggtattgttgattctggttccgag
gaaagtgaaaaatgcagaggtggggaaaagggaaaaagaaagaataagagatcagagagg
caagaagttacttcagatgatgattacagcaatgattctgaaatagatgagaggaaggat
gctaaaaggagaaagaaagaggaaaagagatcaaggaaggagaagaagcgccgaagacgt
gaggagcgacgtcgcagaaaagaagaacgtcgtgcagggaagatgaaggggaagaattac
agtgatgcttctgcttcagatggtgaacatgtaggcaggagggagcttcattcaaatgac
aatgaagagaaggaggatggtcagaagaaacttgagattgagttacgcaagaaggctctt
gaatcacttaaagcaaaaaagggcattagtcactaa
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