Malus sylvestris (European crab apple): 126588924
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Entry
126588924 CDS
T09027
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126588924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126588924
03016 Transfer RNA biogenesis [BR:
msyl03016
]
126588924
03012 Translation factors [BR:
msyl03012
]
126588924
04131 Membrane trafficking [BR:
msyl04131
]
126588924
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126588924
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
126588924
Transfer RNA biogenesis [BR:
msyl03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
126588924
Translation factors [BR:
msyl03012
]
Eukaryotic type
Elongation factors
126588924
Membrane trafficking [BR:
msyl04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
126588924
Exosome [BR:
msyl04147
]
Exosomal proteins
Proteins found in most exosomes
126588924
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
FcpA
SRPRB
AAA_22
Motif
Other DBs
NCBI-GeneID:
126588924
NCBI-ProteinID:
XP_050110044
LinkDB
All DBs
Position
11:complement(11315128..11318085)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVVKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKEPTGAKVTKAAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaagtttcacatcaacattgtggtcattggccatgtcgactctgggaag
tcaaccaccactggtcacttgatctacaagcttggaggtattgacaagcgtgtcattgag
aggttcgagaaggaggctgctgagatgaacaagaggtcattcaagtatgcttgggtgttg
gacaagctcaaggctgagcgcgagcgtggtattacaattgatattgccttgtggaagttt
gagaccaccaagtactactgcactgttattgatgctcctggacatcgtgatttcatcaag
aacatgatcactggtacctcccaggctgattgtgctgtcctcattattgattccaccact
ggtggttttgaggccggtatttccaaggatggtcagacccgtgagcatgctctgcttgca
ttcactcttggtgtcaagcagatgatttgctgctgcaacaagatggatgccactactccc
aagtactcgaaggcaaggtacgatgaaatcgtgaaggaagtctcatcctacctcaagaag
gttgggtacaaccctgacaaaattgcctttgtccccatttctggatttgagggtgacaac
atgattgagaggtccaccaacctagactggtacaagggaccaacccttcttgaggccctt
gacctgatcaatgagcccaagaggccctcagacaagcccctccgtctcccacttcaggat
gtgtacaagattggtggcattggaactgtgcctgtgggacgagttgaaactggtgttgtg
aagcctggtatggttgtgaccttcggtcccactggtctgaccactgaagttaagtctgtt
gagatgcaccatgaagctcttcaggaggctcttcccggtgacaatgtcgggttcaatgtt
aagaatgttgctgtcaaggatctgaagcgtggttttgttgcttccaactccaaggatgat
cctgcaaaggaggctgccaactttacctctcaggtcatcatcatgaaccaccctgggcag
attggaaatggttatgctccagtgctcgattgccacacctcccacattgctgtcaagttt
gctgagatcttgaccaagattgacaggcgatccggtaaggagcttgagaaggagcccaaa
ttcttgaagaacggagatgctggtatggttaagatgattcccaccaagcccatggttgtc
gagaccttctctgagtacccccctctcggacgttttgctgtgagagacatgcgccagacc
gttgctgtgggtgtgatcaagagtgtggagaagaaggagccaactggtgccaaggtgacc
aaagccgcagccaagaagaagtga
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