Malus sylvestris (European crab apple): 126588948
Help
Entry
126588948 CDS
T09027
Name
(RefSeq) protein argonaute 5-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126588948
03036 Chromosome and associated proteins [BR:
msyl03036
]
126588948
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
126588948
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
126588948
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
126588948
microRNA pathway
RISC loading complex
126588948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
126588948
NCBI-ProteinID:
XP_050110066
LinkDB
All DBs
Position
11:13959016..13966187
Genome browser
AA seq
982 aa
AA seq
DB search
MSQRGRGRGRHSDPSYGSDAPPFNRGGRGGGRGRGRQSGAPPSFQSESGPSRGGPGVVAA
PTVTQAPSPAPMAQTPAPRGPAPAQASSSSAPRPAEALLISEMEQKLTMTAPPPSSSKAI
RHPPRPGYGKVGEKVQVRANHFLVEVADRDLHHYDVSITPEVASKKINRDVIKQLVKLYK
ESHLGKRTPAYDGMKSIYTAGPLPFASKEFVVRLAEKEGRESSSAAAGAKRRDRDFKVTL
KLASKPDLYQLQQFLRSQQHESPQDAIQVLDVALRATPSEKYTVAGRSFFAIELGQKGDL
GDGLEYWRGFYQSLRPTQFGLSLNIDVSARAFYDPVLVTVFVKKLLNYRELSRPLPDRDR
LKVKKALKGLKVAVSYRENRSYKISGVSVEPLNKLTFTREDNSRISVEQYYRDTYNIVLR
DVAMPALQSGSDSKPVYLPMELCSIVAGQRYTKKLNERQVTALLRATCQRPGDRERSIYQ
MVKHNAYNKDELVQREFGMHIREDMALINARVLPPPSLKYHDTGREKSENPRMGQWNMIN
KKMVNGGRVDFWACVNFSRLDPNFNFRFCEDLVNMCGSKGVHFHPQPLLAHQSAHPGQIE
RVLRDIHKTSSKKLDEIGHKGKPLQLLIVILPDVTGSYGMIKRICETELGIVSQCCQPRA
ASKLSKQYLENLSLKINVKVGGRNTVLTDAIERRIPRVSDIPTIIFGADVTHPQPGEDSS
PSIAAVVASMDWPEVTKYRGIVSAQVHREEIIQDLYTVKQDPNKGLVAGGMIREHFRAFR
LATGQIPKRVIFFRDGVSEGQFSQVLLYEMDAIRKACQSLQEGYLPPVTFVVVQKRHHTR
LFPTDNRRTDRSGNIQPGTVVDTQICHPTEFDFYLNSHAGIQGTSRPAHYHVLYDENNFT
ADALQMLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGEYSDGGSTTGSTAGGS
GGVRFRALPEIKENVKEVMFYC
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaacgcggccgcggccgaggccgccattccgatccctcgtacggctccgacgcc
ccgccgtttaatcgcggtggtagaggcggaggccgtggtcggggacgacagtccggcgct
ccaccgtcgtttcagtccgaatcgggccctagccgtggtggtcctggagttgtcgccgct
ccgacggtgactcaagctccctcgccggcgccgatggctcaaacaccggctcctcgtggg
ccggcgccggctcaggcttcctccagctcggcgcctcggcccgctgaggctcttctcatc
tctgagatggagcagaaactgacgatgaccgctccgccgccgtcttcttccaaggccatc
cggcatccgccgaggccgggctacgggaaggtcggcgagaaggtccaagtcagggccaac
catttcttagtggaggttgcggatagagatctccatcattacgatgtgtcgattacccct
gaagttgcatcgaaaaagatcaacagggatgtaattaagcagctcgtaaaactttacaag
gaatcccacctgggcaagagaaccccagcttatgatgggatgaaaagtatctatacagca
ggccccttaccatttgcctcgaaagagtttgtggtgaggttggccgagaaggaaggccgg
gagagttcctctgcggcagctggtgccaagagaagggaccgagatttcaaggttactctt
aaattggctagcaaaccggacctttatcaactccagcagttcctacgaagccagcagcat
gagtcgcctcaagacgcaattcaagttctggatgttgctcttagggctacaccttcagaa
aaatacactgttgctgggaggtctttttttgccattgagcttgggcagaaaggtgatctt
ggtgacggtctggaatactggagaggcttttaccagagtctaaggcctactcagtttggg
ctttcactcaacatagatgtatcagcaagagcattttatgatcctgtcctggtaactgta
tttgtgaagaaacttttaaattacagagaattgtcaaggcctttgcctgatcgcgatcgt
ttgaaggtgaaaaaggccttaaaggggctcaaggtagcagtttcttatcgtgagaataga
tcttataaaatcagtggggtctccgtcgaaccgctgaacaagttgacgttcactcgagag
gataatagtagaatttcagtagaacaatattatcgcgatacgtacaatattgtgctaagg
gatgtggcaatgcctgcacttcaatctgggagcgattcaaaacctgtttatttgcctatg
gagctttgttccattgttgctgggcagaggtacactaagaagttgaatgagagacaagta
acagctcttctgagagcaacttgtcaacgccctggagatagagaacgaagtatataccag
atggttaaacacaatgcttacaataaagatgagcttgtccagcgggaatttggaatgcat
ataagagaagatatggctttaattaatgctcgtgtgttgccgccgccttcgctgaaatac
catgacactggtcgtgagaagtctgaaaatccacgaatggggcaatggaacatgatcaat
aagaaaatggttaacggtggtcgagtggatttctgggcatgcgtcaatttctcccgattg
gacccaaattttaacttccgattctgtgaggatttggttaatatgtgtggcagcaaggga
gtgcatttccatccgcaacctttacttgctcatcaatcagcacatcctgggcaaatagag
agggtgcttagagatatccataagacgtctagcaagaaacttgatgaaattggacataag
ggaaagcctcttcagttgttaattgtcattttgcctgatgtcactggatcatatgggatg
ataaaacgaatctgtgaaaccgagttaggaatcgtgtctcagtgctgtcagcctagggca
gcatcaaagctgagtaaacaataccttgaaaatttgtcgctcaagataaatgtgaaggtt
ggcggaaggaacactgttttgactgacgccattgaaagaaggattcctcgggttagtgac
attcccacaatcatctttggtgcggatgttacccatcctcaacctggggaggacagcagt
ccgtcaattgctgctgtggtggcgtccatggattggccagaggtcaccaagtacagggga
attgtttctgcacaggttcaccgtgaagaaatcatccaagatctgtatactgtaaaacag
gaccctaacaagggacttgttgctggaggaatgatcagggagcatttccgagcatttcga
ctagcaactggccaaataccaaaaagagtaatcttcttcagggatggagttagcgaaggg
caatttagtcaagttctgttgtatgaaatggatgctataagaaaggcttgtcaatcactt
caggagggatatctgccaccggttacttttgttgtggtgcagaaaaggcatcatacgcgc
ctgttccctactgataatcggaggactgataggagtggcaatattcaaccaggcactgtc
gttgacacccaaatttgtcatccgacggagtttgacttctatctcaacagtcatgctggc
attcagggaactagcaggcctgcacattaccatgtcttgtatgatgagaacaatttcacc
gcagatgcactgcagatgctaacgaacaacctatgctacacgtatgcaagatgcactcgt
tcagtttccattgttcctcctgcttactatgctcacttggctgccttccgtgcaagatac
tacattgaaggcgagtactcagatggaggttctactaccggatctacagctgggggttct
ggtggtgtgcggttccgtgccctacctgagataaaagaaaatgtgaaagaagttatgttc
tactgctga
DBGET
integrated database retrieval system
