Malus sylvestris (European crab apple): 126589014
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Entry
126589014 CDS
T09027
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00750
Vitamin B6 metabolism
msyl01100
Metabolic pathways
msyl01240
Biosynthesis of cofactors
Module
msyl_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
126589014
Enzymes [BR:
msyl01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
126589014
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
His_biosynth
NMO
TIM
Motif
Other DBs
NCBI-GeneID:
126589014
NCBI-ProteinID:
XP_050110147
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Position
11:complement(6053473..6054845)
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AA seq
312 aa
AA seq
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MADRSGVVTVYGKGAIYETTSKSSPFSVKVGLAQMLRGGVIMDVVNPAQARIAEESGACA
VMALERVPSDIRSQGGVARMSDPQLIKEIKRSVTIPVMAKARIGHFVEAQILEAIGVDYV
DESEVLTLADDEHHINKHNFRVPFVCGCRDLGEALRRIREGAAMIRTKGEAGTGNIVEAV
RHVRHVMGDIRVLRNMDDDEVFAYAKRISAPYDLMMQTKQVGRLPVVHFAAGGVATPADA
ALMMQLGCDGVFVGSGVFKSSDPARRARAIVQASTHYSDPDVLADISCGLGEAMAGINLN
DEKVERFAFRSD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagaagcggcgtcgtcaccgtctacggcaaaggcgccatatacgaaaccacc
agcaagtcttccccgttctccgtcaaagtcggcctcgcccaaatgctccgcggtggcgtc
atcatggacgtcgtcaaccccgcccaggcccgtatcgccgaggaatccggtgcctgcgcc
gtcatggccctcgagcgcgtcccctccgatatccgatcacagggtggtgttgctcgaatg
tccgatccccagctcatcaaggagatcaagcgctccgtcaccatccccgtcatggccaaa
gcccgcatcggccattttgtcgaggcccaaatcctcgaagccatcggcgtcgactacgtc
gacgagagcgaagtcctcaccctcgccgacgacgagcaccacatcaacaagcacaatttt
cgagtcccgttcgtctgcggatgccgggatctcggcgaggcgctccgccggatccgcgag
ggcgccgcgatgatccggacgaagggggaagccggcaccgggaacatcgtcgaagccgtt
cggcacgtccggcacgtgatgggggacatcagggtcttgaggaacatggacgacgacgag
gtgtttgcgtacgcgaagagaatctcggccccgtacgatctcatgatgcagacgaagcag
gtcgggaggctgccggtggtgcattttgccgccggcggcgtggcgactcccgcagacgcg
gcgctgatgatgcagttggggtgcgacggggttttcgtcgggtcgggtgtgttcaagagc
agcgacccggcccggagagcccgggcgattgtgcaggcttcgacccattacagtgacccg
gatgtgctggcggacatcagctgcggattgggcgaggcaatggccgggattaatctgaac
gacgagaaggtcgagaggttcgcatttcggtctgactga
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