Malus sylvestris (European crab apple): 126589642
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Entry
126589642 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126589642
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126589642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126589642
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126589642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
DUF2249
Motif
Other DBs
NCBI-GeneID:
126589642
NCBI-ProteinID:
XP_050110959
LinkDB
All DBs
Position
11:complement(29264792..29269202)
Genome browser
AA seq
310 aa
AA seq
DB search
MSAPFGGPIGSNPSAAGAQLNRDPNMASAEQLVLELSNPQLRENALLELSKKRELFQDLA
PLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNA
HIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEM
GSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGTMVASLADQPSSRLLKHII
RCYLRLSDNPRACDALRSCLPDMLRDATFSVSLREDPTTRRWLQQLLHNVGVSRVPALQG
GGGFDQMMMN
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaccgtttggaggcccgatcggctctaaccccagtgctgccggagcccagctg
aacagggacccgaacatggcgtcggcggagcagttggtgctcgaactcagcaacccccaa
cttcgtgaaaacgcgctccttgaactctccaagaagagagaattatttcaagatttggct
ccattgttgtggaattcttttggtactatagctgctctattacaggagatagtttcaata
taccctgttctgtccccaccaaatttaactcctgcccaatcaaatcgagtttgcaatgct
ctagcacttcttcagtgtgtggcatcacacccagacacaaggatgttgttccttaacgct
catatacctttatatttgtaccctttccttaatacaacaagcaagtcaaggcctttcgag
tacttgagactcactagcttaggggtcattggtgccttagtgaaggtcgacgatacagaa
gtgattagttttcttctatcaactgaaataatcccgttgtgcctgcgaactatggaaatg
ggtagtgaactgtcaaaaacagtggcgacatttattgttcaaaagattttgttggatgac
gtaggcttggattatatctgtactacagctgagcgtttttttgcagtgggtcgagtcttg
ggaaccatggttgcatcacttgctgaccagccttcatctcgcttgctaaaacatattatc
cgatgttatctacgattgtcagataacccaagggcttgtgatgctttgaggagctgtctt
cccgatatgttgagagatgctaccttcagtgtttccctccgtgaagatccaacgacaagg
agatggctgcagcagttgcttcacaacgttggtgttagtcgggttcctgcgcttcagggt
ggaggaggatttgatcagatgatgatgaactaa
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