Malus sylvestris (European crab apple): 126589679
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Entry
126589679 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126589679 isoform X1
KO
K23288
syndetin
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126589679
Membrane trafficking [BR:
msyl04131
]
Protein recycling
Others
EARP complex
126589679
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
Motif
Other DBs
NCBI-GeneID:
126589679
NCBI-ProteinID:
XP_050111005
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Position
11:complement(13800689..13816785)
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AA seq
1114 aa
AA seq
DB search
MQPNLSPFGSVLANPFLFNGDLSEGIETPGVLFLVPFFLFQGGAMDLSKVGEKILSSVRS
ARSLGLLPSASDRPEVPARAAAAAAVARAIAGLPPHQRFSLSSSSEELSSIYGSKHHGQE
VEEIEEEFYEENFDPVRHILEHIPSEESELAYFEKQAALRLAQLDRVAERLSRNVMEHHE
VMVKGMHLVRELEKDLKIANVICMNGRRHLTSSRNEVSRDLIVNSNSKKKQALLDMLPVL
TELGHALKMQAELESLVEEGNYCKAFQVLSEYLQLLDTFSDLSAVQEMSRGVEVWLGKTL
QKLDSLLLGVCQEFNEEGYITVVDAYALIGDISGLAEKIQSFFMQEVLSETHSILKNIVQ
EEDQGFHMQNSRLTYSDLCLQIPEPKFRQCLLNTLAILFKLMCSYHEIMGFQLDNRDSAG
KTPSMTQKESDISPTPGGVQQISPPCSSQKVNGSLAESVDIVPGSAYIDESTTTCSLVEP
AGNTTSTNYQNLVDEASKDDSTTSTSGSPWYQLRKDATAFVSQTLQRGRKNLWQLTATRV
SVLLSSASVSSASIHQFLKNYEDLGVFILAGEAFCGIEAADFRQKLKAVCENYFLAFHRQ
NIHALKMVLEREIWLILPPDTVQEITFPGLAGDGAPIIVPSEGNSNARVLHSDKSTRVVD
TGAKKSGFSNWLRNGNPFLLKLAHTSKEGLKWNSTTGESDGNFSERLGDKVSPQNSDSSH
SNGANFVSEEENEDLLADFIDEDSQLPSRISKPRLSRNQSLHYNDGEIIAQTGSSICLLR
SMDKYARLMQKLEIVNVEFFKGICQLFEVFFHFVFETFAQQNNNAGGKGSPDPINYRLKT
ALSRIQQDCDQWIKSPSSSSTSLNSSYTDITPMSPPSNTPGTSFGLKERCAGADTITLVA
RILHRSKAHLKTMLLQNNAAVVEDFYAHLVDAVPYLVEHIHRTTARQLLHINGYVDRIAN
AKWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGGIRKEVQDLLLEYGLEIVAQTLIEGLS
RVRRCTDEGRALMSLDLQVLINGLQHFVAMNVKPHLQIVEAFIKAYYLPETEYVHWARAH
PEYTKNQIVGLINLVATMKSWKRKTRLEVLEKIE
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgaatctgtctcccttcggcagcgttttggcgaatccgtttttgttcaatggc
gatttgagcgagggcattgagacccctggggttttgttcttggtccccttttttctgttc
caaggtggtgcaatggatttatcaaaggtcggcgagaagattctgagctccgttaggtct
gccagatcgctcggccttctcccttctgcttctgatcgaccagaggttcccgcacgagct
gcagctgccgcagctgttgctcgtgctattgctggactgcctccgcatcaaaggtttagt
ctatcatcaagctctgaagaattgagctcgatatatggaagcaaacatcatggtcaagaa
gtagaggagatagaggaagaattctacgaagagaattttgatccagtcagacatattttg
gagcatattccatctgaagaaagtgagctggcttattttgagaaacaggccgctcttaga
ttggcacaactggatagagtagctgaacgtttatcccgcaatgttatggaacatcatgaa
gtaatggtgaaggggatgcatttggtcagggaattggagaaagacttgaaaattgcaaat
gtcatctgcatgaatggaaggcggcatctgacctcatcaaggaatgaggtttctagggat
ctcatcgtaaattccaattccaaaaagaaacaagctcttctggacatgcttcctgtttta
actgagcttggtcatgcactgaaaatgcaagcagagctcgagtctctggttgaggaagga
aattactgcaaggcctttcaagtcctgtctgaatatctacagctgttagatactttttca
gatctttctgcagtacaagagatgagccgtggtgtagaggtttggctgggaaaaactctt
caaaagctggattccttgttgctaggagtgtgccaggagttcaatgaggagggctatata
actgtggtcgatgcttatgcactaattggggatatctctggccttgctgagaagatacaa
agtttctttatgcaggaagttctatcagaaacccactctatattgaagaatattgtgcaa
gaggaggatcagggatttcacatgcaaaatagtcgacttacctacagcgatctatgcctt
cagatacctgaaccaaagtttaggcagtgtttgttaaacacactagctatccttttcaag
ttgatgtgttcatatcatgaaatcatgggctttcagctggataatagggattcagccggt
aaaactccaagcatgacacagaaggaaagtgacatctctccgactcctgggggggttcag
caaatttcacctccttgttcttcccaaaaagttaatggctctcttgccgaatctgtagat
atagtgcctggttcagcgtacatagacgaatctacaaccacctgctctttggttgaacct
gcaggaaacacaacttccactaattatcaaaatttagttgatgaggcaagtaaggatgac
agtacaacatcaacaagtggatccccatggtatcaattacggaaagatgccacagcattt
gtttcacaaacccttcagaggggacgcaaaaatctttggcaactcacagctactcgtgta
tcggtcttgctttcttcggcttctgtttcttctgctagcatacaccaattcttgaaaaac
tatgaagatctgggtgtctttatcttggctggggaagcattttgcggaattgaagcagct
gacttcaggcagaagttgaaggcagtatgtgaaaattattttttagcttttcatcggcaa
aatatacatgcgcttaaaatggtgttggaaagagaaatttggttgatactgccaccagat
acagtacaagaaattacatttcccgggcttgccggtgatggagcacctataattgttcca
tctgagggtaattctaatgctagggttctacattctgataagtctacaagagttgttgat
actggtgccaagaagagtggattctctaattggctaagaaatggaaacccctttttgtta
aagctggcacatacatccaaagaaggtcttaagtggaacagtacaactggtgaatctgat
ggtaattttagtgaaaggcttggtgataaggtctctccacaaaacagtgattcaagtcat
tctaatggtgctaattttgtttcggaagaagaaaatgaagatcttcttgcagactttatt
gatgaggatagtcaactcccaagtcgaatttcgaaacctagactgtcaagaaatcaatct
ttacattataatgatggagaaatcatagctcagactggatcatctatttgtcttctaagg
tcaatggataaatatgccaggcttatgcagaaattggaaatagtcaacgttgagttcttc
aagggaatatgccagttgtttgaggtattttttcattttgtgtttgaaacatttgctcag
caaaacaacaatgcaggtggaaaagggtcacctgatccgattaattatcggctgaagaca
gccttgtccagaatacaacaagactgtgaccagtggataaagtccccgtcatcttcatcc
acatctctaaattcgtcatatacagacatcacacctatgagtcctcccagtaacacacca
ggaacatcctttggtctcaaggaaagatgcgcaggtgctgacactatcacccttgttgct
cgaatattgcatagatctaaagctcatctcaagacaatgctacttcagaataatgctgct
gtggttgaagacttctatgcacatctggttgatgctgtaccatatcttgtagagcacatt
cataggacaactgcaagacaactgctccatattaatggttatgtggatcggatagccaat
gcaaaatgggaagtgaaagagcttggactagagcataatgggtatgttgatttgttattg
ggagaattcaagcactataaaacaaggcttgctcatgggggaattcgcaaggaggttcaa
gacctcctcttagaatacggacttgaaattgtggcccaaactctcatagaaggactctcc
cgtgtcaggaggtgtacagatgaagggcgggctctcatgtcattggatctacaggttttg
atcaatggcttgcagcattttgtggcaatgaacgtgaagccccatttacaaatagttgaa
gccttcattaaggcatactatcttccggaaaccgaatatgtgcactgggcacgtgctcac
ccggaatacacaaaaaatcaaattgttgggttgatcaaccttgttgccactatgaaaagt
tggaagagaaaaaccagactggaagtgctagaaaagattgaatga
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