Malus sylvestris (European crab apple): 126589796
Help
Entry
126589796 CDS
T09027
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
126589796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126589796
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126589796
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
U-box type E3
126589796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
MLKL_N
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
Arm_2
HEAT_EZ
Neurochondrin
KAP
zf-C3HC4_2
MCAfunc
zf-C3HC4
Scorpion_toxin_alpha-beta
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
126589796
NCBI-ProteinID:
XP_050111153
LinkDB
All DBs
Position
11:9205732..9211608
Genome browser
AA seq
693 aa
AA seq
DB search
MSTLRQLQTSANPEPPQNGAVVAEIGGDVAMEEDRGALVQSLIDTVNEIASISDYKCPVK
KQYCNLARRLKLLTPMFEEIRDSKEVVSQETLKALLSFMEALKSAKELLRFGSESSKIYL
VLEREQIMMKFHEVTARLEQALSGISYENLDISDEVKEQVELVLAQFRRAKGRFDSPDVE
LYGDLLSLYSKNEAATDPAVLRRLVDKLELTGIAELTQESLALHEMVTFSGGDPGESIEK
MSMLLKKIKDFVQTENPDMDAPAGGKNILASCSGQASTDKNHKVPPVIPDDFRCPISLEL
MKDPVIVSTGQTYERSCIEKWLEAGHATCPKTQQSLFNTTLTPNYALRSLIAQWCEANGI
EPPKRPNSRPIKTTSSCSPAERTKIEILLRKLMSVSPEDQRSAAGEIRLLAKRNADNRVA
IAEAGAIPLLVGLLSTPDSRTQEHAVTALLNLSICEENKGSIITSGAIPGIVHVLKNGGM
EARENAAATLFSLSVVDENKVRIGASGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGN
KGKAVRAGVVSTLMKLLTEPGGGMVDEALAILAILSSHAEGKAAIGAAEAVPVLVEVIGT
GSPRNRENAAAVLVHLCSGDQQHIVEAQELGVMTSLLELAQNGTDRGKRKAAQLLERMNR
FAEAQAQAQAQAQPDDQSETQSHPPTTPNAVDG
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccctccgtcaactccagacctccgcaaacccagaacccccacaaaacggtgcc
gttgtggctgagatcggcggcgacgtagctatggaggaagacagaggagctctggtgcag
agcctgatcgacacggtcaacgaaatagcttcgatctccgactacaagtgtccggtcaag
aagcagtactgcaatttggcgaggaggttgaagctgctgaccccaatgttcgaggagatt
agggatagcaaggaggtggtttctcaggagactttgaaagccttgctttcgttcatggaa
gctctgaaatcggccaaggagctgctcagattcggaagcgaaagcagcaagatttacctg
gttttagaaagggagcaaattatgatgaagtttcatgaggtgacagctcgattggagcaa
gctttaagtggaatctcctatgaaaatcttgacatatcagatgaagttaaggaacaggtt
gagcttgttcttgctcagtttagaagagccaaagggaggttcgattcgcctgatgttgag
ctctatggagatctcttatccctttacagtaaaaatgaggcagcaacagatccagctgtc
ctaagaagattggttgataagttagaattgacaggtatagctgaactcacacaagagtca
ctagccttgcatgagatggttactttcagtggtggggatcctggggagagcatcgagaag
atgtcaatgctactgaaaaaaattaaagattttgtacaaacagaaaaccccgacatggat
gctcctgcagggggaaagaatatattagcaagctgcagcgggcaagcatccaccgacaag
aatcacaaagtccccccagttataccagatgattttcggtgtccaatatctttggagtta
atgaaggaccccgtcattgtttcaacagggcagacatatgagcgttcctgtattgagaag
tggctggaagcagggcatgcgacatgtccgaaaacacaacaaagcctctttaacaccacc
ctcacaccgaactatgctttacgtagcctcatagcccagtggtgtgaggcaaatggcatt
gaaccaccaaaaagacccaattctcgacctattaaaactacatcctcctgctctccagca
gaacgcactaagattgaaattctcctccgcaagctgatgtctgttagccccgaagatcaa
aggtctgctgcgggtgaaatccggcttcttgccaaacgtaatgcagacaatcgtgtggct
attgctgaagctggtgcaatacccctgcttgtaggcctcctttcaacccccgactcccgt
acccaagagcatgctgtcactgcactcctcaacctttccatatgtgaggagaacaaagga
agcatcataacctctggagcaattcctggtattgttcatgtcctcaagaatggaggcatg
gaagcacgggaaaatgcagctgcgaccctttttagtctttctgtcgtggatgaaaataaa
gtcagaattggtgcttcgggagccattccgccacttgttacattgctgagtgaaggtacc
caaagggggaagaaagatgctgcaactgcactttttaacttgtgcatttatcaaggtaac
aaggggaaggcagtaagggccggtgttgtttcgaccctaatgaagctgctgacagaacct
ggaggtggaatggtggatgaagcactggccattctagcaatactctctagccatgctgaa
gggaaagcagccattggagctgctgaggcagtgcctgttttggttgaagttattgggaca
ggatctccccgaaacagagaaaatgcagccgcggttttggtgcatctttgttctggagac
caacaacatatagtagaggctcaggaacttggggtgatgacttcgttattggagttggct
caaaatggcacagatagaggcaagagaaaggctgcacagttgcttgagcgaatgaatcgg
tttgctgaggcgcaggcacaggcacaggcacaggcacaacctgatgatcaatctgagacc
cagtcacatccacccaccactccaaatgccgttgacggatga
DBGET
integrated database retrieval system
