Malus sylvestris (European crab apple): 126589863
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Entry
126589863 CDS
T09027
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
126589863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126589863
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
126589863
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
126589863
NCBI-ProteinID:
XP_050111257
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Position
11:39770044..39773815
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AA seq
584 aa
AA seq
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MPKMANSFPEEVLEHVFSFIQTDQDRNSISTVCKSWYEIERWCRRRIFIGNCYAVSPRMV
IRRFPDIRSIELKGKPHFADFNLVPEGWGGYVYPWIAAMASAYPWLEEIKLKRMVVTDET
LELIAKSFKNFKLLVLSSCEGFSTDGLAAIAANCRNLRELDLHESDVEDLSGHWLSHFPD
TYTSLVSLNIACLGSELSFSALERLVGRCPNLRSLRLNRSVPLDRLANLLRQAPRLSELG
TGAYSAELRPDIFTILSGAFSRCKELKSLSGFWDVVPPYLTAIYSICPGLTSLNLSYSNI
QSADLVKLVSECPNLQRLWVLDYIEDVGLNALAESCKDLRELRVFPSDPFVVEPNVSLTE
QGLISVSEGCPKLHSVLYFCRQMSNDALITIARNQPNFTCFRLCIIEPKIPDYLTLQPLD
VGFGAIVENCKNLRRLSISGLLTDRVFDYIGTYGKNLEMLSVAFAGDSDLGLHHILSGCD
NLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQKLPRLNVEVIDER
GHPESRPENSPVEKLYIYRSVAGPRFDMPGFVWTMGKDSTLRIT
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaatggcgaactcgtttcccgaggaggtgctggagcacgtgttctcattcata
cagacggaccaggaccggaactcgatctcgacggtgtgcaagtcgtggtacgagatcgaa
cggtggtgcaggcggcggattttcatcgggaactgctacgccgtcagccctaggatggtg
atcaggcggttcccggacattagatccatcgagctcaagggaaagcctcacttcgctgac
ttcaatctggtccccgaaggctggggtgggtacgtgtacccctggatcgccgccatggcc
agcgcctacccttggctcgaagagatcaagctcaagaggatggtagtcaccgacgagacc
ttggagctgattgccaagtccttcaagaatttcaagctcctcgtgctttcgtcctgtgag
gggttcagtactgacgggctcgccgccattgctgccaattgcaggaatctgcgggagctg
gacttgcatgagagtgatgtggaggacctaagtgggcattggctcagccattttcctgat
acgtacacatcactagtttccctcaacattgcctgcctagggtctgagttgagtttctct
gccctggagcgcctggtgggtaggtgtcccaacctgaggagtctccggctcaatcgttct
gtgcctcttgacaggctagccaatctacttcgccaggcacccaggctgagtgagttaggc
acaggggcgtactcggctgagttgcggcctgatatcttcacaatcctatcaggtgccttc
tcaagatgcaaggaactcaagagcctatctggattttgggatgtggtaccaccgtatctt
acggctatttattctatctgccctgggctaacatcactaaatttgagttattccaatatt
caaagcgcggatcttgtaaagcttgttagcgaatgcccgaatctgcagcgcctctgggta
ttggattacattgaagatgttggccttaatgccctggcggaatcttgcaaggatctacga
gagttgagggtgttcccttcagatccatttgtggtggaaccaaatgtttccttgacagag
cagggcctcatatctgtctctgagggctgtccaaagctccactcagttctgtacttctgc
cggcaaatgtccaatgatgcattaatcaccattgctaggaatcagccgaactttacatgt
tttcgtctttgtataattgagcccaaaattcccgactacctgacccttcagcctcttgat
gtgggttttggggccattgttgagaactgcaagaatctccgacgattgtccatctctggt
ctactaactgatcgagtgtttgattatatcggaacctatggtaaaaatttggagatgctg
tctgtagcctttgccggagatagtgacttggggcttcatcatatattgtctgggtgcgat
aatcttcgtaagctggagatcagggactgtccttttggtgacaaggctcttttggccaat
gctgcaaagctggagacaatgcgatccctttggatgtcttcttgctcagtgagttatgga
gcatgtaagctgctaggccagaagttgccgaggcttaatgtggaagtcattgatgagagg
ggacacccagaatccaggccggagaactctcccgttgagaagctctacatctataggtcg
gttgcagggcctaggtttgacatgcctggctttgtatggaccatgggtaaagattcgacg
ttgaggattacttga
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